ECODEvolutionary Classification of Protein Domains

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ECOD (Evolutionary Classification of Protein Domains) is a hierarchical classification of protein domains based on evolutionary relationships. It combines automated sequence and structure analysis with manual curation.

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e7oyfA1 - ECOD Domain | ECOD

ECOD/Domains/e7oyfA1

e7oyfA1

UID: 002801642

PDB

Range: A:1-47,A:78-430
PDB: 7OYF chain A(all domains)

Molecule: Depupylase

3D Structure

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Related Domains

Browse other domains in Pup_ligase →

Classification

AArchitecturea+b two layers(a.11)

XX-groupGlutamine synthetase-like(321)

HH-groupGlutamine synthetase/guanido kinase(321.1)

TT-groupGlutamine synthetase/guanido kinase(321.1.1)

FFamilyPup_ligase(321.1.1.6)

Ligands

in contact, ≤ 4 Å

Adenosine disphosphateADP
drugDrugBank DB16833
trifluoromagnesate monohydrateKQB
Magnesium ionMG

Pfam Families

PF03136Pup_ligase

Pup-ligase protein

ClanCL0286GCS

External Links

ECOD PDB View: 7OYF RCSB PDB: 7OYF PDBe: 7OYF

Downloads

Download Domain PDB Download Domain FASTA Full PDB Structure

metal

+ 3 additives (1,2-ETHANEDIOL, DI(HYDROXYETHYL)ETHER, Triethylene glycol)

1,2-ETHANEDIOLEDO
DI(HYDROXYETHYL)ETHERPEG
Triethylene glycolPGE

Shown in the structure viewer. Drug annotations from DrugDomain.