ECODEvolutionary Classification of Protein Domains

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ECOD (Evolutionary Classification of Protein Domains) is a hierarchical classification of protein domains based on evolutionary relationships. It combines automated sequence and structure analysis with manual curation.

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e1yzwD1 - ECOD Domain | ECOD

ECOD/Domains/e1yzwD1

e1yzwD1

UID: 000282702

PDB

Range: D:4-226
PDB: 1YZW chain D(all domains)
UniProt: Q95W85 (all domains)

Molecule: GFP-like non-fluorescent chromoprotein

3D Structure

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Related Domains

Browse other domains in GFP →

Classification

AArchitecturebeta barrels(a.1)

XX-groupGFP-like(271)

HH-groupGFP-like(271.1)

TT-groupGFP-like(271.1.1)

FFamilyGFP(271.1.1.1)

Ligands

in contact, ≤ 4 Å

Only buffers and crystallization additives.

+ 1 additive (DI(HYDROXYETHYL)ETHER)

DI(HYDROXYETHYL)ETHERPEG

Shown in the structure viewer. Drug annotations from DrugDomain.

Pfam Families

Green fluorescent protein

ClanCL0069GFP

External Links

ECOD PDB View: 1YZW RCSB PDB: 1YZW PDBe: 1YZW UniProt: Q95W85

Downloads

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