ECODEvolutionary Classification of Protein Domains

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ECOD (Evolutionary Classification of Protein Domains) is a hierarchical classification of protein domains based on evolutionary relationships. It combines automated sequence and structure analysis with manual curation.

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e7mnpB1 - ECOD Domain | ECOD

ECOD/Domains/e7mnpB1

e7mnpB1

UID: 002880044

PDB

Range: B:1405-1443
PDB: 7MNP chain B(all domains)

Molecule: E3 SUMO-protein ligase RanBP2

3D Structure

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Related Domains

Browse other domains in zf-RanBP →

Classification

AArchitecturefew secondary structure elements(a.19)

XX-groupRubredoxin-like(375)

HH-groupRubredoxin-related(375.1)

TT-groupRubredoxin-related(375.1.1)

FFamilyzf-RanBP(375.1.1.4)

Ligands

in contact, ≤ 4 Å

Guanosine-5'-DiphosphateGDP
drugDrugBank DB04315
Zinc ionZN
metal

Shown in the structure viewer. Drug annotations from DrugDomain.

Pfam Families

PF00641Zn_ribbon_RanBP

Zn-finger in Ran binding protein and others

ClanCL0167Zn_Beta_Ribbon

External Links

ECOD PDB View: 7MNP RCSB PDB: 7MNP PDBe: 7MNP

Downloads

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