ECODEvolutionary Classification of Protein Domains

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ECOD (Evolutionary Classification of Protein Domains) is a hierarchical classification of protein domains based on evolutionary relationships. It combines automated sequence and structure analysis with manual curation.

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e7pnyX2 - ECOD Domain | ECOD

ECOD/Domains/e7pnyX2

e7pnyX2

UID: 002883466

PDB

Range: X:47-346
PDB: 7PNY chain X(all domains)

Molecule: 28S ribosomal protein S29, mitochondrial

3D Structure

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Related Domains

Browse other domains in DAP3 →

Classification

AArchitecturea/b three-layered sandwiches(a.17)

XX-groupP-loop domains-like(2004)

HH-groupP-loop domains-related(2004.1)

TT-groupP-loop containing nucleoside triphosphate hydrolases(2004.1.1)

FFamilyDAP3(2004.1.1.172)

Ligands

in contact, ≤ 4 Å

ATPATP
drugDrugBank DB00171
Guanosine-5'-DiphosphateGDP
drugDrugBank DB04315
Magnesium ion

Pfam Families

Mitochondrial ribosomal death-associated protein 3

ClanCL0023P-loop_NTPase

External Links

ECOD PDB View: 7PNY RCSB PDB: 7PNY PDBe: 7PNY

Downloads

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metal

Shown in the structure viewer. Drug annotations from DrugDomain.