ECODEvolutionary Classification of Protein Domains

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About ECOD

ECOD (Evolutionary Classification of Protein Domains) is a hierarchical classification of protein domains based on evolutionary relationships. It combines automated sequence and structure analysis with manual curation.

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e7zw0Ld1 - ECOD Domain | ECOD

ECOD/Domains/e7zw0Ld1

e7zw0Ld1

UID: 002967075

PDB

Range: Ld:2-149
PDB: 7ZW0 chain Ld(all domains)

Molecule: 60S ribosomal protein L28

3D Structure

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Related Domains

Browse other domains in Ribosomal_L27A →

Classification

AArchitecturea/b three-layered sandwiches(a.17)

XX-groupRibosomal protein L13/L15p/L18e/L32e(2490)

HH-groupRibosomal proteins L15p and L18e(2490.3)

TT-groupRibosomal proteins L15p and L18e(2490.3.1)

FFamilyRibosomal_L27A(2490.3.1.1)

Ligands

in contact, ≤ 4 Å

SpermidineSPD
drugDrugBank DB03566
Magnesium ionMG
metal

Shown in the structure viewer. Drug annotations from DrugDomain.

Pfam Families

PF00828Ribosomal_L27A

Ribosomal proteins 50S-L15, 50S-L18e, 60S-L27A

ClanCL0588Ribos_L15p_L18e

External Links

ECOD PDB View: 7ZW0 RCSB PDB: 7ZW0 PDBe: 7ZW0

Downloads

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