ECODEvolutionary Classification of Protein Domains

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About ECOD

ECOD (Evolutionary Classification of Protein Domains) is a hierarchical classification of protein domains based on evolutionary relationships. It combines automated sequence and structure analysis with manual curation.

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e8aubB1 - ECOD Domain | ECOD

ECOD/Domains/e8aubB1

e8aubB1

UID: 002982079

PDB

Range: B:10-384
PDB: 8AUB chain B(all domains)

Molecule: 12-oxophytodienoate reductase 3

3D Structure

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Related Domains

Browse other domains in Oxidored_FMN →

Classification

AArchitecturea/b barrels(a.16)

XX-groupTIM beta/alpha-barrel(2002)

HH-groupTIM barrels(2002.1)

TT-groupTIM barrels(2002.1.1)

FFamilyOxidored_FMN(2002.1.1.32)

Ligands

in contact, ≤ 4 Å

Flavin mononucleotideFMN
drugDrugBank DB03247
ethyl (2~{Z})-2-hydroxyimino-3-oxidanylidene-pentanoateO8I

+ 1 additive (DI(HYDROXYETHYL)ETHER)

DI(HYDROXYETHYL)ETHER

Pfam Families

PF00724Oxidored_FMN

NADH:flavin oxidoreductase / NADH oxidase family

ClanCL0036TIM_barrel

External Links

ECOD PDB View: 8AUB RCSB PDB: 8AUB PDBe: 8AUB

Downloads

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Shown in the structure viewer. Drug annotations from DrugDomain.