ECODEvolutionary Classification of Protein Domains

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ECOD (Evolutionary Classification of Protein Domains) is a hierarchical classification of protein domains based on evolutionary relationships. It combines automated sequence and structure analysis with manual curation.

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e7eq2A1 - ECOD Domain | ECOD

ECOD/Domains/e7eq2A1

e7eq2A1

UID: 002990676

PDB

Range: A:7-178
PDB: 7EQ2 chain A(all domains)

Molecule: Ras-related protein Rab-1A

3D Structure

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Related Domains

Browse other domains in Ras →

Classification

AArchitecturea/b three-layered sandwiches(a.17)

XX-groupP-loop domains-like(2004)

HH-groupP-loop domains-related(2004.1)

TT-groupP-loop containing nucleoside triphosphate hydrolases(2004.1.1)

FFamilyRas(2004.1.1.19)

Ligands

in contact, ≤ 4 Å

Guanosine-5'-DiphosphateGDP
drugDrugBank DB04315
Cobalt hexammine ionNCO
drugDrugBank DB03350

Pfam Families

Ras family

ClanCL0023P-loop_NTPase

External Links

ECOD PDB View: 7EQ2 RCSB PDB: 7EQ2 PDBe: 7EQ2

Downloads

Download Domain PDB Download Domain FASTA Full PDB Structure

Magnesium ion

metal

+ 1 additive ((4r)-2-Methylpentane-2,4-Diol)

(4r)-2-Methylpentane-2,4-DiolMPD
DrugBank DB03564

Shown in the structure viewer. Drug annotations from DrugDomain.