ECODEvolutionary Classification of Protein Domains

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ECOD (Evolutionary Classification of Protein Domains) is a hierarchical classification of protein domains based on evolutionary relationships. It combines automated sequence and structure analysis with manual curation.

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e8g5yLN1 - ECOD Domain | ECOD

ECOD/Domains/e8g5yLN1

e8g5yLN1

UID: 003031242

PDB

Range: LN:2-183
PDB: 8G5Y chain LN(all domains)

Molecule: 60S ribosomal protein L15

3D Structure

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Related Domains

Browse other domains in Ribosomal_L15e →

Classification

AArchitecturea+b two layers(a.11)

XX-groupAlpha-beta plaits(304)

HH-groupRibosomal proteins S24e, L23 and L15e(304.109)

TT-groupRibosomal proteins S24e, L23 and L15e(304.109.1)

FFamilyRibosomal_L15e(304.109.1.3)

Ligands

in contact, ≤ 4 Å

SpermidineSPD
drugDrugBank DB03566
Magnesium ionMG
metal
1,4-DIAMINOBUTANEPUT

Pfam Families

PF00827Ribosomal_L15e

Ribosomal L15

ClanCL0652S24e_L23_L15e

External Links

ECOD PDB View: 8G5Y RCSB PDB: 8G5Y PDBe: 8G5Y

Downloads

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Shown in the structure viewer. Drug annotations from DrugDomain.