ECODEvolutionary Classification of Protein Domains

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About ECOD

ECOD (Evolutionary Classification of Protein Domains) is a hierarchical classification of protein domains based on evolutionary relationships. It combines automated sequence and structure analysis with manual curation.

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e8g6jLj1 - ECOD Domain | ECOD

ECOD/Domains/e8g6jLj1

e8g6jLj1

UID: 003031677

PDB

Range: Lj:2-87
PDB: 8G6J chain Lj(all domains)

Molecule: 60S ribosomal protein L37

3D Structure

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Related Domains

Browse other domains in Ribosomal_L37e →

Classification

AArchitecturefew secondary structure elements(a.19)

XX-groupRubredoxin-like(375)

HH-groupRubredoxin-related(375.1)

TT-groupRubredoxin-related(375.1.1)

FFamilyRibosomal_L37e(375.1.1.16)

Ligands

in contact, ≤ 4 Å

SpermidineSPD
drugDrugBank DB03566
Magnesium ionMG
metal
Zinc ionZN

Pfam Families

PF01907Ribosomal_L37e

Ribosomal protein L37e

ClanCL0167Zn_Beta_Ribbon

External Links

ECOD PDB View: 8G6J RCSB PDB: 8G6J PDBe: 8G6J

Downloads

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metal

Shown in the structure viewer. Drug annotations from DrugDomain.