ECODEvolutionary Classification of Protein Domains

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About ECOD

ECOD (Evolutionary Classification of Protein Domains) is a hierarchical classification of protein domains based on evolutionary relationships. It combines automated sequence and structure analysis with manual curation.

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e8am5b2 - ECOD Domain | ECOD

ECOD/Domains/e8am5b2

e8am5b2

UID: 003060424

PDB

Range: b:403-731
PDB: 8AM5 chain b(all domains)

Molecule: Photosystem I P700 chlorophyll a apoprotein A2

3D Structure

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Related Domains

Browse other domains in PsaA_PsaB →

Classification

AArchitecturealpha bundles(a.7)

XX-groupBacterial photosystem II reaction centre L and M subunits-like(5037)

HH-groupBacterial photosystem II reaction centre L and M subunits-like(5037.1)

TT-groupBacterial photosystem II reaction centre L and M subunits-like(5037.1.1)

FFamilyPsaA_PsaB(5037.1.1.2)

Ligands

in contact, ≤ 4 Å

Beta caroteneBCR
drugDrugBank DB06755
Chlorophyll ACLA
drugDrugBank DB02133
1,2-Dipalmitoyl-Phosphatidyl-Glycerole

Pfam Families

PF00223PsaA_PsaB

Photosystem I psaA/psaB protein

External Links

ECOD PDB View: 8AM5 RCSB PDB: 8AM5 PDBe: 8AM5

Downloads

Download Domain PDB Download Domain FASTA Full PDB Structure

drugDrugBank DB02043

PhylloquinonePQN

drugDrugBank DB01022

Chlorophyll a isomerCL0

(3'R)-3'-hydroxy-beta,beta-caroten-4-oneEQ3

1,2-DISTEAROYL-MONOGALACTOSYL-DIGLYCERIDELMG

Iron/sulfur clusterSF4

(1R,2S)-4-{(1E,3E,5E,7E,9E,11E,13E,15E,17E)-18-[(4S)-4-hydroxy-2,6,6-trimethylcyclohex-1-en-1-yl]-3,7,12,16-tetramethyloctadeca-1,3,5,7,9,11,13,15,17-nonaen-1-yl}-2,5,5-trimethylcyclohex-3-en-1-olZEX

beta,beta-carotene-4,4'-dione45D

within 5 Å only

Shown in the structure viewer. Drug annotations from DrugDomain.