ECODEvolutionary Classification of Protein Domains

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ECOD (Evolutionary Classification of Protein Domains) is a hierarchical classification of protein domains based on evolutionary relationships. It combines automated sequence and structure analysis with manual curation.

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e8cmiH2 - ECOD Domain | ECOD

ECOD/Domains/e8cmiH2

e8cmiH2

UID: 003072826

PDB

Range: H:0-91
PDB: 8CMI chain H(all domains)

Molecule: Human leukocyte antigen DR beta chain allotype DR1 (DRB1*0101)

3D Structure

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Related Domains

Browse other domains in MHC_II_beta →

Classification

AArchitecturea+b two layers(a.11)

XX-groupMHC antigen-recognition domain(233)

HH-groupMHC antigen-recognition domain(233.1)

TT-groupMHC antigen-recognition domain(233.1.1)

FFamilyMHC_II_beta(233.1.1.2)

Ligands

in contact, ≤ 4 Å

Only buffers and crystallization additives.

+ 2 additives (Sulfate ion, 1,2-ETHANEDIOL)

Sulfate ionSO4
DrugBank DB14546
1,2-ETHANEDIOLEDO

Shown in the structure viewer. Drug annotations from DrugDomain.

Pfam Families

PF00969MHC_II_beta

Class II histocompatibility antigen, beta domain

ClanCL0343MHC

External Links

ECOD PDB View: 8CMI RCSB PDB: 8CMI PDBe: 8CMI

Downloads

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