ECODEvolutionary Classification of Protein Domains

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About ECOD

ECOD (Evolutionary Classification of Protein Domains) is a hierarchical classification of protein domains based on evolutionary relationships. It combines automated sequence and structure analysis with manual curation.

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e8cnjB1 - ECOD Domain | ECOD

ECOD/Domains/e8cnjB1

e8cnjB1

UID: 003072942

PDB

Range: B:1-166
PDB: 8CNJ chain B(all domains)

Molecule: GTPase HRas

3D Structure

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Related Domains

Browse other domains in Ras →

Classification

AArchitecturea/b three-layered sandwiches(a.17)

XX-groupP-loop domains-like(2004)

HH-groupP-loop domains-related(2004.1)

TT-groupP-loop containing nucleoside triphosphate hydrolases(2004.1.1)

FFamilyRas(2004.1.1.19)

Ligands

in contact, ≤ 4 Å

Guanosine-5'-DiphosphateGDP
drugDrugBank DB04315
Beryllium trifluoride ionBEF
Magnesium ionMG

Pfam Families

Ras family

ClanCL0023P-loop_NTPase

External Links

ECOD PDB View: 8CNJ RCSB PDB: 8CNJ PDBe: 8CNJ

Downloads

Download Domain PDB Download Domain FASTA Full PDB Structure

metal

+ 1 additive ((4r)-2-Methylpentane-2,4-Diol)

(4r)-2-Methylpentane-2,4-DiolMPD
DrugBank DB03564

Shown in the structure viewer. Drug annotations from DrugDomain.