ECODEvolutionary Classification of Protein Domains

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About ECOD

ECOD (Evolutionary Classification of Protein Domains) is a hierarchical classification of protein domains based on evolutionary relationships. It combines automated sequence and structure analysis with manual curation.

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e7zrtA1 - ECOD Domain | ECOD

ECOD/Domains/e7zrtA1

e7zrtA1

UID: 003112891

PDB

Range: A:1-247
PDB: 7ZRT chain A(all domains)

Molecule: Urokinase-type plasminogen activator

3D Structure

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Related Domains

Browse other domains in Trypsin →

Classification

AArchitecturebeta barrels(a.1)

XX-groupcradle loop barrel(1)

HH-groupRIFT-related(1.1)

TT-groupFMN-binding split barrel 2(1.1.17)

FFamilyTrypsin(1.1.17.1)

Ligands

in contact, ≤ 4 Å

1,3,5-tris(bromomethyl)benzeneZBR

+ 4 additives (Sulfate ion, Pentaethylene glycol, 1,2-ETHANEDIOL, …)

Sulfate ionSO4
DrugBank DB14546
Pentaethylene glycol1PE

Pfam Families

PF00089Trypsin

Trypsin

ClanCL0124Peptidase_PA

External Links

ECOD PDB View: 7ZRT RCSB PDB: 7ZRT PDBe: 7ZRT

Downloads

Download Domain PDB Download Domain FASTA Full PDB Structure

1,2-ETHANEDIOLEDO

DI(HYDROXYETHYL)ETHERPEG

Shown in the structure viewer. Drug annotations from DrugDomain.