ECODEvolutionary Classification of Protein Domains

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About ECOD

ECOD (Evolutionary Classification of Protein Domains) is a hierarchical classification of protein domains based on evolutionary relationships. It combines automated sequence and structure analysis with manual curation.

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Q5Z800_F1_nD1 - ECOD Domain | ECOD

ECOD/Domains/Q5Z800_F1_nD1

Q5Z800_F1_nD1

UID: 003424480

AlphaFold

Range: 41-200,526-615
AlphaFold: AF-Q5Z800
UniProt: Q5Z800 (all domains)
Gene: Os06g0712400

Protein: Os06g0712400 protein (cDNA clone:J013108E08, full insert sequence)

3D Structure

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Related Domains

Browse other domains in MINDY_DUB →

Classification

AArchitecturea+b complex topology(a.14)

XX-groupCysteine proteinases-like(219)

HH-groupCysteine proteinases(219.1)

TT-groupCysteine proteinases(219.1.1)

FFamilyMINDY_DUB(219.1.1.23)

Pfam Families

PF04424MINDY_DUB

MINDY deubiquitinase

ClanCL0125Peptidase_CA

External Links

AlphaFold DB: Q5Z800 UniProt: Q5Z800

Representative

This domain is classified based on similarity to:

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Full AlphaFold Structure (PDB)Full AlphaFold Structure (mmCIF)

Domain coordinates: residues 41-200,526-615