ECODEvolutionary Classification of Protein Domains

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About ECOD

ECOD (Evolutionary Classification of Protein Domains) is a hierarchical classification of protein domains based on evolutionary relationships. It combines automated sequence and structure analysis with manual curation.

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A4I4I0_F1_nD1 - ECOD Domain | ECOD

ECOD/Domains/A4I4I0_F1_nD1

A4I4I0_F1_nD1

UID: 003601527

AlphaFold

Range: 1341-1430,1476-1560,1591-1660,1691-1820
AlphaFold: AF-A4I4I0
UniProt: A4I4I0 (all domains)
Gene: LINJ_29_1320

Protein: Sec16 Sec23-binding domain-containing protein

3D Structure

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Related Domains

Browse other domains in Sec16_C →

Classification

AArchitecturealpha superhelices(a.9)

XX-groupRepetitive alpha hairpins(109)

HH-groupNucleoporin NUP85/Nucleoporin NUP145 C-terminal domain(109.21)

TT-groupNucleoporin NUP85/Nucleoporin NUP145 C-terminal domain(109.21.1)

FFamilySec16_C(109.21.1.3)

Pfam Families

PF12931TPR_Sec16

Sec16 Sec23-binding domain

ClanCL0020TPR

External Links

AlphaFold DB: A4I4I0 UniProt: A4I4I0

Representative

This domain is classified based on similarity to:

Downloads

Full AlphaFold Structure (PDB)Full AlphaFold Structure (mmCIF)

Domain coordinates: residues 1341-1430,1476-1560,1591-1660,1691-1820