ECODEvolutionary Classification of Protein Domains

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About ECOD

ECOD (Evolutionary Classification of Protein Domains) is a hierarchical classification of protein domains based on evolutionary relationships. It combines automated sequence and structure analysis with manual curation.

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A0A1D6KHG6_F1_nD3 - ECOD Domain | ECOD

ECOD/Domains/A0A1D6KHG6_F1_nD3

A0A1D6KHG6_F1_nD3

UID: 003676676

AlphaFold

Range: 386-440,476-495,521-590,616-720
AlphaFold: AF-A0A1D6KHG6
UniProt: A0A1D6KHG6 (all domains)
Gene: ZEAMMB73_Zm00001d031236

Protein: alanine--tRNA ligase (EC 6.1.1.7)

3D Structure

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Related Domains

Browse other domains in MINDY_DUB →

Classification

AArchitecturea+b complex topology(a.14)

XX-groupCysteine proteinases-like(219)

HH-groupCysteine proteinases(219.1)

TT-groupCysteine proteinases(219.1.1)

FFamilyMINDY_DUB(219.1.1.23)

Pfam Families

PF04424MINDY_DUB

MINDY deubiquitinase

ClanCL0125Peptidase_CA

External Links

AlphaFold DB: A0A1D6KHG6 UniProt: A0A1D6KHG6

Representative

This domain is classified based on similarity to:

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Full AlphaFold Structure (PDB)Full AlphaFold Structure (mmCIF)

Domain coordinates: residues 386-440,476-495,521-590,616-720