ECODEvolutionary Classification of Protein Domains

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About ECOD

ECOD (Evolutionary Classification of Protein Domains) is a hierarchical classification of protein domains based on evolutionary relationships. It combines automated sequence and structure analysis with manual curation.

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A0A1D6HL34_F1_nD1 - ECOD Domain | ECOD

ECOD/Domains/A0A1D6HL34_F1_nD1

A0A1D6HL34_F1_nD1

UID: 003678989

AlphaFold

Range: 96-1095
AlphaFold: AF-A0A1D6HL34
UniProt: A0A1D6HL34 (all domains)
Gene: ZEAMMB73_Zm00001d018145

Protein: Presequence protease 2 chloroplastic/mitochondrial

3D Structure

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Related Domains

Browse other domains in Peptidase_M16, Peptidase_M16_C, M16C_assoc, PreP_C →

Classification

AArchitecturea+b two layers(a.11)

XX-groupLuxS, MPP, ThrRS/AlaRS common domain(309)

HH-groupLuxS, MPP, ThrRS/AlaRS common domain(309.1)

TT-groupLuxS/MPP-like metallohydrolase(309.1.1)

FFamilyPeptidase_M16, Peptidase_M16_C, M16C_assoc, PreP_C(309.1.1.16)

Pfam Families

PF00675Peptidase_M16

Insulinase (Peptidase family M16)

ClanCL0094Peptidase_ME

PF05193Peptidase_M16_C

Peptidase M16 inactive domain

ClanCL0094Peptidase_ME

PF08367M16C_assoc

Peptidase M16C associated

ClanCL0094Peptidase_ME

PreP C-terminal domain

External Links

AlphaFold DB: A0A1D6HL34 UniProt: A0A1D6HL34

Representative

This domain is classified based on similarity to:

Downloads

Full AlphaFold Structure (PDB)Full AlphaFold Structure (mmCIF)

Domain coordinates: residues 96-1095

Peptidase_ME