ECODEvolutionary Classification of Protein Domains

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ECOD (Evolutionary Classification of Protein Domains) is a hierarchical classification of protein domains based on evolutionary relationships. It combines automated sequence and structure analysis with manual curation.

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e3i7dB1 - ECOD Domain | ECOD

ECOD/Domains/e3i7dB1

e3i7dB1

UID: 000368152

PDB

Range: B:1-158
PDB: 3I7D chain B(all domains)
UniProt: Q5LPC9 (all domains)
Gene: SPO2919

Molecule: sugar phosphate isomerase

3D Structure

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Related Domains

Browse other domains in Cupin_2 →

Classification

AArchitecturebeta sandwiches(a.3)

XX-groupjelly-roll(10)

HH-groupDouble-stranded beta-helix(10.12)

TT-groupDouble-stranded beta-helix(10.12.1)

FFamilyCupin_2(10.12.1.39)

Ligands

in contact, ≤ 4 Å

Only buffers and crystallization additives.

+ 2 additives (Cacodylate ion, DI(HYDROXYETHYL)ETHER)

Cacodylate ionCAC
DI(HYDROXYETHYL)ETHERPEG

Shown in the structure viewer. Drug annotations from DrugDomain.

Pfam Families

PF07883Cupin_2

Cupin domain

ClanCL0029Cupin

External Links

ECOD PDB View: 3I7D RCSB PDB: 3I7D PDBe: 3I7D UniProt: Q5LPC9

Downloads

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