ECODEvolutionary Classification of Protein Domains

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About ECOD

ECOD (Evolutionary Classification of Protein Domains) is a hierarchical classification of protein domains based on evolutionary relationships. It combines automated sequence and structure analysis with manual curation.

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Q4E180_F1_nD1 - ECOD Domain | ECOD

ECOD/Domains/Q4E180_F1_nD1

Q4E180_F1_nD1

UID: 003699083

AlphaFold

Range: 46-335
AlphaFold: AF-Q4E180
UniProt: Q4E180 (all domains)
Gene: Tc00.1047053511585.20

Protein: RNA-editing ligase 1, mitochondrial (EC 6.5.1.3)

3D Structure

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Related Domains

Browse other domains in RNA_ligase →

Classification

AArchitecturea+b complex topology(a.14)

XX-groupProtein kinase/SAICAR synthase/ATP-grasp(206)

HH-groupProtein kinase/SAICAR synthase/ATP-grasp(206.1)

TT-groupATP-grasp(206.1.3)

FFamilyRNA_ligase(206.1.3.23)

Pfam Families

PF09414RNA_ligase

RNA ligase

ClanCL0179ATP-grasp

External Links

AlphaFold DB: Q4E180 UniProt: Q4E180

Representative

This domain is classified based on similarity to:

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Full AlphaFold Structure (PDB)Full AlphaFold Structure (mmCIF)

Domain coordinates: residues 46-335