ECODEvolutionary Classification of Protein Domains

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About ECOD

ECOD (Evolutionary Classification of Protein Domains) is a hierarchical classification of protein domains based on evolutionary relationships. It combines automated sequence and structure analysis with manual curation.

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Q5A301_F1_nD1 - ECOD Domain | ECOD

ECOD/Domains/Q5A301_F1_nD1

Q5A301_F1_nD1

UID: 003781627

AlphaFold

Range: 16-555,576-1034
AlphaFold: AF-Q5A301
UniProt: Q5A301 (all domains)
Gene: CYM1

Protein: Presequence protease, mitochondrial (PreP) (EC 3.4.24.-) (Pitrilysin metalloproteinase)

3D Structure

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Related Domains

Browse other domains in Peptidase_M16, Peptidase_M16_C, M16C_assoc, PreP_C →

Classification

AArchitecturea+b two layers(a.11)

XX-groupLuxS, MPP, ThrRS/AlaRS common domain(309)

HH-groupLuxS, MPP, ThrRS/AlaRS common domain(309.1)

TT-groupLuxS/MPP-like metallohydrolase(309.1.1)

FFamilyPeptidase_M16, Peptidase_M16_C, M16C_assoc, PreP_C(309.1.1.16)

Pfam Families

PF00675Peptidase_M16

Insulinase (Peptidase family M16)

ClanCL0094Peptidase_ME

PF05193Peptidase_M16_C

Peptidase M16 inactive domain

ClanCL0094Peptidase_ME

PF08367M16C_assoc

Peptidase M16C associated

ClanCL0094Peptidase_ME

PreP C-terminal domain

External Links

AlphaFold DB: Q5A301 UniProt: Q5A301

Representative

This domain is classified based on similarity to:

Downloads

Full AlphaFold Structure (PDB)Full AlphaFold Structure (mmCIF)

Domain coordinates: residues 16-555,576-1034

Peptidase_ME