ECODEvolutionary Classification of Protein Domains

Home Browse Search Download Help

About ECOD

ECOD (Evolutionary Classification of Protein Domains) is a hierarchical classification of protein domains based on evolutionary relationships. It combines automated sequence and structure analysis with manual curation.

Quick Links

Browse Classification
Search
Download Data
Documentation

Resources

Grishin Lab
UT Southwestern
RCSB PDB
AlphaFold DB
ecod.database@gmail.com

© 2014-2026 Grishin Lab / HHMI / UTSW

A0A1D8PRS2_F1_nD3 - ECOD Domain | ECOD

ECOD/Domains/A0A1D8PRS2_F1_nD3

A0A1D8PRS2_F1_nD3

UID: 003783002

AlphaFold

Range: 91-410
AlphaFold: AF-A0A1D8PRS2
UniProt: A0A1D8PRS2 (all domains)
Gene: CAALFM_CR00670CA

Protein: tRNA:m(4)X modification enzyme TRM13 (EC 2.1.1.225)

3D Structure

Loading viewer...

Related Domains

Browse other domains in TRM13 →

Classification

AArchitecturea/b three-layered sandwiches(a.17)

XX-groupRossmann-like(2003)

HH-groupRossmann-related(2003.1)

TT-groupS-adenosyl-L-methionine-dependent methyltransferases(2003.1.5)

FFamilyTRM13(2003.1.5.95)

Pfam Families

Methyltransferase TRM13

ClanCL0063NADP_Rossmann

External Links

AlphaFold DB: A0A1D8PRS2 UniProt: A0A1D8PRS2

Representative

This domain is classified based on similarity to:

Downloads

Full AlphaFold Structure (PDB)Full AlphaFold Structure (mmCIF)

Domain coordinates: residues 91-410