ECODEvolutionary Classification of Protein Domains

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About ECOD

ECOD (Evolutionary Classification of Protein Domains) is a hierarchical classification of protein domains based on evolutionary relationships. It combines automated sequence and structure analysis with manual curation.

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Q6PFM9_F1_nD3 - ECOD Domain | ECOD

ECOD/Domains/Q6PFM9_F1_nD3

Q6PFM9_F1_nD3

UID: 003895154

AlphaFold

Range: 561-675
AlphaFold: AF-Q6PFM9
UniProt: Q6PFM9 (all domains)
Gene: wdr48

Protein: WD repeat-containing protein 48 (USP1-associated factor 1)

3D Structure

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Related Domains

Browse other domains in DUF3337 →

Classification

AArchitecturea+b two layers(a.11)

XX-groupbeta-Grasp(221)

HH-groupUbiquitin-related(221.1)

TT-groupUbiquitin-like(221.1.1)

FFamilyDUF3337(221.1.1.43)

Pfam Families

PF11816Ubl_WDR48-Bun107

WDR48/Bun107, ubiquitin-like domain

ClanCL0072Ubiquitin

External Links

AlphaFold DB: Q6PFM9 UniProt: Q6PFM9

Representative

This domain is classified based on similarity to:

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Full AlphaFold Structure (PDB)Full AlphaFold Structure (mmCIF)

Domain coordinates: residues 561-675