ECODEvolutionary Classification of Protein Domains

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About ECOD

ECOD (Evolutionary Classification of Protein Domains) is a hierarchical classification of protein domains based on evolutionary relationships. It combines automated sequence and structure analysis with manual curation.

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Q8IIG8_F1_nD3 - ECOD Domain | ECOD

ECOD/Domains/Q8IIG8_F1_nD3

Q8IIG8_F1_nD3

UID: 004029784

AlphaFold

Range: 521-550,601-675,911-1020,1121-1210
AlphaFold: AF-Q8IIG8
UniProt: Q8IIG8 (all domains)
Gene: PF3D7_1119900

Protein: Protein transport protein SEC16, putative

3D Structure

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Related Domains

Browse other domains in Sec16_C →

Classification

AArchitecturealpha superhelices(a.9)

XX-groupRepetitive alpha hairpins(109)

HH-groupNucleoporin NUP85/Nucleoporin NUP145 C-terminal domain(109.21)

TT-groupNucleoporin NUP85/Nucleoporin NUP145 C-terminal domain(109.21.1)

FFamilySec16_C(109.21.1.3)

Pfam Families

PF12931TPR_Sec16

Sec16 Sec23-binding domain

ClanCL0020TPR

External Links

AlphaFold DB: Q8IIG8 UniProt: Q8IIG8

Representative

This domain is classified based on similarity to:

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Full AlphaFold Structure (PDB)Full AlphaFold Structure (mmCIF)

Domain coordinates: residues 521-550,601-675,911-1020,1121-1210