ECODEvolutionary Classification of Protein Domains

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About ECOD

ECOD (Evolutionary Classification of Protein Domains) is a hierarchical classification of protein domains based on evolutionary relationships. It combines automated sequence and structure analysis with manual curation.

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Grishin Lab
UT Southwestern
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B3MJV4_nD3 - ECOD Domain | ECOD

ECOD/Domains/B3MJV4_nD3

B3MJV4_nD3

UID: 004056161

AlphaFold

Range: 466-528,696-730,771-915
AlphaFold: AF-B3MJV4
UniProt: B3MJV4 (all domains)

3D Structure

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Related Domains

Browse other domains in Smg8_Smg9 →

Classification

AArchitecturebeta sandwiches(a.3)

XX-groupImmunoglobulin-like beta-sandwich(11)

HH-groupImmunoglobulin-related(11.1)

TT-groupImmunoglobulin/Fibronectin type III/E set domains/PapD-like(11.1.1)

FFamilySmg8_Smg9(11.1.1.923)

Pfam Families

PF10220Smg8_Smg9

Smg8_Smg9

External Links

AlphaFold DB: B3MJV4 UniProt: B3MJV4

Representative

This domain is classified based on similarity to:

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Full AlphaFold Structure (PDB)Full AlphaFold Structure (mmCIF)

Domain coordinates: residues 466-528,696-730,771-915