ECODEvolutionary Classification of Protein Domains

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About ECOD

ECOD (Evolutionary Classification of Protein Domains) is a hierarchical classification of protein domains based on evolutionary relationships. It combines automated sequence and structure analysis with manual curation.

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e3pg6B1 - ECOD Domain | ECOD

ECOD/Domains/e3pg6B1

e3pg6B1

UID: 000406865

PDB

Range: B:607-740
PDB: 3PG6 chain B(all domains)
UniProt: Q8TDB6 (all domains)
Gene: DTX3L

Molecule: E3 ubiquitin-protein ligase DTX3L

3D Structure

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Related Domains

Browse other domains in DTC →

Classification

AArchitecturea+b two layers(a.11)

XX-groupCarboxyl terminal domain of human deltex 3-like(3169)

HH-groupCarboxyl terminal domain of human deltex 3-like(3169.1)

TT-groupCarboxyl terminal domain of human deltex 3-like(3169.1.1)

FFamilyDTC(3169.1.1.1)

Ligands

in contact, ≤ 4 Å

Only buffers and crystallization additives.

+ 2 additives (Citric acid, DI(HYDROXYETHYL)ETHER)

Citric acidCIT
DrugBank DB04272
DI(HYDROXYETHYL)ETHERPEG

Shown in the structure viewer. Drug annotations from DrugDomain.

Pfam Families

Deltex C-terminal domain

External Links

ECOD PDB View: 3PG6 RCSB PDB: 3PG6 PDBe: 3PG6 UniProt: Q8TDB6

Downloads

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