ECODEvolutionary Classification of Protein Domains

Home Browse Search Download Help

About ECOD

ECOD (Evolutionary Classification of Protein Domains) is a hierarchical classification of protein domains based on evolutionary relationships. It combines automated sequence and structure analysis with manual curation.

Quick Links

Browse Classification
Search
Download Data
Documentation

Resources

Grishin Lab
UT Southwestern
RCSB PDB
AlphaFold DB
ecod.database@gmail.com

© 2014-2026 Grishin Lab / HHMI / UTSW

C6DDJ9_nD2 - ECOD Domain | ECOD

ECOD/Domains/C6DDJ9_nD2

C6DDJ9_nD2

UID: 004254245

AlphaFold

Range: 86-445
AlphaFold: AF-C6DDJ9
UniProt: C6DDJ9 (all domains)

3D Structure

Loading viewer...

Related Domains

Browse other domains in tRNA_U5-meth_tr →

Classification

AArchitecturea/b three-layered sandwiches(a.17)

XX-groupRossmann-like(2003)

HH-groupRossmann-related(2003.1)

TT-groupS-adenosyl-L-methionine-dependent methyltransferases(2003.1.5)

FFamilytRNA_U5-meth_tr(2003.1.5.53)

Pfam Families

PF05958tRNA_U5-meth_tr

tRNA (Uracil-5-)-methyltransferase

ClanCL0063NADP_Rossmann

External Links

AlphaFold DB: C6DDJ9 UniProt: C6DDJ9

Representative

This domain is classified based on similarity to:

Downloads

Full AlphaFold Structure (PDB)Full AlphaFold Structure (mmCIF)

Domain coordinates: residues 86-445