ECODEvolutionary Classification of Protein Domains

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About ECOD

ECOD (Evolutionary Classification of Protein Domains) is a hierarchical classification of protein domains based on evolutionary relationships. It combines automated sequence and structure analysis with manual curation.

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P22886_nD1 - ECOD Domain | ECOD

ECOD/Domains/P22886_nD1

P22886_nD1

UID: 004355987

AlphaFold

Range: 6-70
AlphaFold: AF-P22886
UniProt: P22886 (all domains)
Gene: Int-Tn

Protein: Transposase from transposon Tn916 (Integrase)

3D Structure

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Related Domains

Browse other domains in Integrase_DNA →

Classification

AArchitecturea+b two layers(a.11)

XX-groupDNA-binding domain(252)

HH-groupGCC-box binding domain-like(252.2)

TT-groupGCC-box binding domain-like(252.2.1)

FFamilyIntegrase_DNA(252.2.1.2)

Pfam Families

PF02920Integrase_DNA

DNA binding domain of tn916 integrase

ClanCL0081MBD-like

External Links

AlphaFold DB: P22886 UniProt: P22886

Representative

This domain is classified based on similarity to:

Downloads

Full AlphaFold Structure (PDB)Full AlphaFold Structure (mmCIF)

Domain coordinates: residues 6-70