ECODEvolutionary Classification of Protein Domains

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About ECOD

ECOD (Evolutionary Classification of Protein Domains) is a hierarchical classification of protein domains based on evolutionary relationships. It combines automated sequence and structure analysis with manual curation.

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Q52DF3_nD1 - ECOD Domain | ECOD

ECOD/Domains/Q52DF3_nD1

Q52DF3_nD1

UID: 004358873

AlphaFold

Range: 16-185
AlphaFold: AF-Q52DF3
UniProt: Q52DF3 (all domains)
Gene: SYF1

Protein: Pre-mRNA-splicing factor SYF1

3D Structure

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Related Domains

Browse other domains in HAT_Syf1_CNRKL1_N →

Classification

AArchitecturealpha superhelices(a.9)

XX-groupRepetitive alpha hairpins(109)

HH-groupARM repeat(109.4)

TT-groupARM repeat(109.4.1)

FFamilyHAT_Syf1_CNRKL1_N(109.4.1.888)

Pfam Families

PF23233HAT_Syf1_CNRKL1_N

Pre-mRNA-splicing factor Syf1/CNRKL1 N-terminal HAT repeat

ClanCL0020TPR

External Links

AlphaFold DB: Q52DF3 UniProt: Q52DF3

Representative

This domain is classified based on similarity to:

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Full AlphaFold Structure (PDB)Full AlphaFold Structure (mmCIF)

Domain coordinates: residues 16-185