ECODEvolutionary Classification of Protein Domains

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About ECOD

ECOD (Evolutionary Classification of Protein Domains) is a hierarchical classification of protein domains based on evolutionary relationships. It combines automated sequence and structure analysis with manual curation.

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Q6FKB1_nD1 - ECOD Domain | ECOD

ECOD/Domains/Q6FKB1_nD1

Q6FKB1_nD1

UID: 004484266

AlphaFold

Range: 286-430
AlphaFold: AF-Q6FKB1
UniProt: Q6FKB1 (all domains)
Gene: SET1

Protein: Histone-lysine N-methyltransferase, H3 lysine-4 specific (EC 2.1.1.354) (COMPASS component SET1) (SET domain-containing protein 1)

3D Structure

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Related Domains

Browse other domains in SET1_RBD →

Classification

AArchitecturea+b two layers(a.11)

XX-groupAlpha-beta plaits(304)

HH-groupRNA-binding domain, RBD(304.9)

TT-groupRNA-binding domain, RBD(304.9.1)

FFamilySET1_RBD(304.9.1.34)

Pfam Families

PF21569SET1_RBD

Histone-lysine N-methyltransferase, RNA-binding domain

ClanCL0221RRM

External Links

AlphaFold DB: Q6FKB1 UniProt: Q6FKB1

Representative

This domain is classified based on similarity to:

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Full AlphaFold Structure (PDB)Full AlphaFold Structure (mmCIF)

Domain coordinates: residues 286-430