ECODEvolutionary Classification of Protein Domains

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About ECOD

ECOD (Evolutionary Classification of Protein Domains) is a hierarchical classification of protein domains based on evolutionary relationships. It combines automated sequence and structure analysis with manual curation.

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P0AED8_nD2 - ECOD Domain | ECOD

ECOD/Domains/P0AED8_nD2

P0AED8_nD2

UID: 004638647

AlphaFold

Range: 176-290
AlphaFold: AF-P0AED8
UniProt: P0AED8 (all domains)
Gene: dapE

Protein: Succinyl-diaminopimelate desuccinylase (SDAP desuccinylase) (EC 3.5.1.18) (N-succinyl-LL-2,6-diaminoheptanedioate amidohydrolase)

3D Structure

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Related Domains

Browse other domains in M20_dimer →

Classification

AArchitecturea+b two layers(a.11)

XX-groupAlpha-beta plaits(304)

HH-groupBacterial exopeptidase dimerisation domain(304.25)

TT-groupBacterial exopeptidase dimerisation domain(304.25.1)

FFamilyM20_dimer(304.25.1.1)

Pfam Families

PF07687M20_dimer

Peptidase dimerisation domain

External Links

AlphaFold DB: P0AED8 UniProt: P0AED8

Representative

This domain is classified based on similarity to:

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Full AlphaFold Structure (PDB)Full AlphaFold Structure (mmCIF)

Domain coordinates: residues 176-290