ECODEvolutionary Classification of Protein Domains

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About ECOD

ECOD (Evolutionary Classification of Protein Domains) is a hierarchical classification of protein domains based on evolutionary relationships. It combines automated sequence and structure analysis with manual curation.

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T0D7A2_nD2 - ECOD Domain | ECOD

ECOD/Domains/T0D7A2_nD2

T0D7A2_nD2

UID: 004656478

AlphaFold

Range: 1-30,386-515
AlphaFold: AF-T0D7A2
UniProt: T0D7A2 (all domains)
Gene: cas12b

Protein: CRISPR-associated endonuclease Cas12b (EC 3.1.-.-) (AacC2c1) (CRISPR-associated endonuclease C2c1)

3D Structure

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Related Domains

Browse other domains in C2c1_WED-II →

Classification

AArchitecturebeta barrels(a.1)

XX-groupOB-fold(2)

HH-groupSmall protein B (SmpB)(2.21)

TT-groupSmall protein B (SmpB)(2.21.1)

FFamilyC2c1_WED-II(2.21.1.2)

Pfam Families

PF22204C2c1_WED-II

CRISPR-associated endonuclease C2c1, wedge domain, second region

External Links

AlphaFold DB: T0D7A2 UniProt: T0D7A2

Representative

This domain is classified based on similarity to:

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Full AlphaFold Structure (PDB)Full AlphaFold Structure (mmCIF)

Domain coordinates: residues 1-30,386-515