ECODEvolutionary Classification of Protein Domains

Home Browse Search Download Help

About ECOD

ECOD (Evolutionary Classification of Protein Domains) is a hierarchical classification of protein domains based on evolutionary relationships. It combines automated sequence and structure analysis with manual curation.

Quick Links

Browse Classification
Search
Download Data
Documentation

Resources

Grishin Lab
UT Southwestern
RCSB PDB
AlphaFold DB
ecod.database@gmail.com

© 2014-2026 Grishin Lab / HHMI / UTSW

e8syiD01 - ECOD Domain | ECOD

ECOD/Domains/e8syiD01

e8syiD01

UID: 004868475

PDB

Range: D:1-43,D:81-82,D:120-187,D:223-385
PDB: 8SYI chain D(all domains)

3D Structure

Loading viewer...

Related Domains

Browse other domains in RNA_pol_Rpb1_2, RNA_pol_Rpb1_1 →

Classification

AArchitecturea+b complex topology(a.14)

XX-groupN-terminal domain in RNA-polymerase beta-prime subunit(4246)

HH-groupN-terminal domain in RNA-polymerase beta-prime subunit(4246.1)

TT-groupN-terminal domain in RNA-polymerase beta-prime subunit(4246.1.1)

FFamilyRNA_pol_Rpb1_2, RNA_pol_Rpb1_1(4246.1.1.4)

Pfam Families

PF00623RNA_pol_Rpb1_2

RNA polymerase Rpb1, domain 2

PF04997RNA_pol_Rpb1_1

RNA polymerase Rpb1, domain 1

External Links

ECOD PDB View: 8SYI RCSB PDB: 8SYI PDBe: 8SYI

Downloads

Download Domain PDB Download Domain FASTA Full PDB Structure