PDB 8SYI
ELECTRON MICROSCOPY0 chains24 ECOD domains
3D Structure(domains colored, ligands/nucleic acids shown)
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Domains by Chain
Chain Aview chain
2 domainsChain Bview chain
2 domainsChain Cview chain
7 domainsChain Dview chain
4 domainsChain Eview chain
1 domainChain Gview chain
1 domainAll Domains (24)
| # | Chain | Domain ID | Range | Family | Classification |
|---|---|---|---|---|---|
| 1 | A | e8syiA1 | A:49-170 | RNA_pol_A_bac | 240 → 240.2 → 240.2.1 |
| 2 | A | e8syiA2 | A:2-48,A:171-227 | RNA_pol_L | 305 → 305.1 → 305.1.1 |
| 3 | B | e8syiB1 | B:49-170 | RNA_pol_A_bac | 240 → 240.2 → 240.2.1 |
| 4 | B | e8syiB2 | B:2-48,B:171-227 | RNA_pol_L | 305 → 305.1 → 305.1.1 |
| 5 | C | e8syiC01 | C:32-146,C:331-368 | RNA_pol_Rpb2_1 | 4010 → 4010.1 → 4010.1.1 |
| 6 | C | e8syiC02 | C:147-330 | RNA_pol_Rpb2_2 | 4041 → 4041.1 → 4041.1.1 |
| 7 | C | e8syiC03 | C:440-575 | RNA_pol_Rpb2_45 | 4042 → 4042.1 → 4042.1.1 |
| 8 | C | e8syiC04 | C:576-647 | 325.1.7.0 | 325 → 325.1 → 325.1.7 |
| 9 | C | e8syiC05 | C:648-684,C:810-954 | RNA_pol_Rpb2_6 | 1 → 1.1 → 1.1.2 |
| 10 | C | e8syiC06 | C:684-820 | RNA_pol_Rpb2_6 | 1 → 1.1 → 1.1.2 |
| 11 | C | e8syiC07 | C:955-1062 | RNA_pol_Rpb2_6,RNA_pol_Rpb2_7 | 4043 → 4043.1 → 4043.1.1 |
| 12 | D | e8syiD01 | D:1-43,D:81-82,D:120-187,D:223-385 | RNA_pol_Rpb1_2, RNA_pol_Rpb1_1 | 4246 → 4246.1 → 4246.1.1 |
| 13 | D | e8syiD02 | D:386-419,D:463-544 | RNA_pol_Rpb1_2, RNA_pol_Rpb1_3 | 1 → 1.1 → 1.1.2 |
| 14 | D | e8syiD03 | D:420-462 | RNA_pol_Rpb1_2 | 1 → 1.1 → 1.1.2 |
| 15 | D | e8syiD04 | D:545-622 | 4959.1.1.0 | 4959 → 4959.1 → 4959.1.1 |
| 16 | E | e8syiE1 | E:7-69 | RNA_pol_Rpb6 | 152 → 152.1 → 152.1.1 |
| 17 | G | e8syiG1 | G:19-138 | NusG | 304 → 304.17 → 304.17.1 |
| 18 | Z | e8syiZ01 | Z:1-121,Z:422-431 | RNA_pol_Rpb1_3 | 4959 → 4959.1 → 4959.1.1 |
| 19 | Z | e8syiZ02 | Z:122-281 | RNA_pol_Rpb1_5,RNA_pol_Rpb1_4 | 4958 → 4958.1 → 4958.1.1 |
| 20 | Z | e8syiZ03 | Z:282-364,Z:367-368 | RNA_pol_Rpb1_5 | 275 → 275.1 → 275.1.1 |
| 21 | Z | e8syiZ04 | Z:365-366,Z:369-411 | 4954.1.1.0 | 4954 → 4954.1 → 4954.1.1 |
| 22 | Z | e8syiZ05 | Z:412-421,Z:432-467 | 325.1.7.0 | 325 → 325.1 → 325.1.7 |
| 23 | Z | e8syiZ06 | Z:986-1069 | 325.1.7.0 | 325 → 325.1 → 325.1.7 |
| 24 | Z | e8syiZ07 | Z:1070-1243 | RNA_pol_Rpb1_5 | 275 → 275.1 → 275.1.1 |
Visualization Legend
ECOD domains (colored by index)Unclassified protein regionsNucleic acids (RNA/DNA)Ligands/cofactors