ECODEvolutionary Classification of Protein Domains

Home Browse Search Download Help

About ECOD

ECOD (Evolutionary Classification of Protein Domains) is a hierarchical classification of protein domains based on evolutionary relationships. It combines automated sequence and structure analysis with manual curation.

Quick Links

Browse Classification
Search
Download Data
Documentation

Resources

Grishin Lab
UT Southwestern
RCSB PDB
AlphaFold DB
ecod.database@gmail.com

© 2014-2026 Grishin Lab / HHMI / UTSW

e5y88C3 - ECOD Domain | ECOD

ECOD/Domains/e5y88C3

e5y88C3

UID: 005093516

PDB

Range: C:859-975
PDB: 5Y88 chain C(all domains)
UniProt: P36048 (all domains)
Gene: SNU114

Molecule: Pre-mRNA-splicing factor SNU114 (114 kDa U5 small nuclear ribonucleoprotein component) (Growth inhibitory protein 10)

3D Structure

Loading viewer...

Related Domains

Browse other domains in EFG_C →

Classification

AArchitecturea+b two layers(a.11)

XX-groupAlpha-beta plaits(304)

HH-groupEF-G C-terminal domain-like(304.24)

TT-groupEF-G C-terminal domain-like(304.24.1)

FFamilyEFG_C(304.24.1.1)

Pfam Families

Elongation factor G C-terminus

ClanCL0437EF-G_C

External Links

ECOD PDB View: 5Y88 RCSB PDB: 5Y88 PDBe: 5Y88 UniProt: P36048

Downloads

Download Domain PDB Download Domain FASTA Full PDB Structure