ECODEvolutionary Classification of Protein Domains

Home Browse Search Download Help

About ECOD

ECOD (Evolutionary Classification of Protein Domains) is a hierarchical classification of protein domains based on evolutionary relationships. It combines automated sequence and structure analysis with manual curation.

Quick Links

Browse Classification
Search
Download Data
Documentation

Resources

Grishin Lab
UT Southwestern
RCSB PDB
AlphaFold DB
ecod.database@gmail.com

© 2014-2026 Grishin Lab / HHMI / UTSW

e8jdkz1 - ECOD Domain | ECOD

ECOD/Domains/e8jdkz1

e8jdkz1

UID: 005149775

PDB

Range: z:57-134
PDB: 8JDK chain z(all domains)

3D Structure

Loading viewer...

Related Domains

Browse other domains in Ribosomal_S5 →

Classification

AArchitectureextended segments(a.20)

XX-groupN-terminal region in 40S ribosomal protein rpS2 (S5p)(3274)

HH-groupN-terminal region in 40S ribosomal protein rpS2 (S5p)(3274.1)

TT-groupN-terminal region in 40S ribosomal protein rpS2 (S5p)(3274.1.1)

FFamilyRibosomal_S5(3274.1.1.1)

Pfam Families

PF00333Ribosomal_S5

Ribosomal protein S5, N-terminal domain

ClanCL0196DSRM

External Links

ECOD PDB View: 8JDK RCSB PDB: 8JDK PDBe: 8JDK

Downloads

Download Domain PDB Download Domain FASTA Full PDB Structure