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PDB 8JDK

ELECTRON MICROSCOPY0 chains86 ECOD domains
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3D Structure(domains colored, ligands/nucleic acids shown)

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Domains by Chain

All Domains (86)

#ChainDomain IDRangeFamilyClassification
10e8jdk010:92-227Ribosomal_S3_C230 → 230.2 → 230.2.1
20e8jdk020:1-99KH_2327 → 327.11 → 327.11.1
31e8jdk111:2-116Ribosomal_S4e,S4,RS4NT221 → 221.1 → 221.1.2
41e8jdk121:176-263KOW,40S_S4_C4 → 4.1 → 4.1.1
51e8jdk131:117-175Ribosomal_S4e2 → 2.1 → 2.1.1
62e8jdk212:14-204Ribosomal_S7167 → 167.1 → 167.1.1
73e8jdk313:1-237Ribosomal_S6e239 → 239.1 → 239.1.1
84e8jdk414:108-193Ribosomal_S7e327 → 327.18 → 327.18.1
94e8jdk424:5-107Ribosomal_S7e327 → 327.18 → 327.18.1
105e8jdk515:2-207Ribosomal_S8e3174 → 3174.1 → 3174.1.1
116e8jdk616:2-186Ribosomal_S4,S4221 → 221.1 → 221.1.2
127e8jdk717:2-95S10_plectin101 → 101.1 → 101.1.2
138e8jdk818:2-153Ribosomal_S17,Ribosomal_S17_N2 → 2.1 → 2.1.1
149e8jdk919:83-151Ribosomal_S15616 → 616.1 → 616.1.1
159e8jdk929:2-82Ribosomal_S13_N101 → 101.40 → 101.40.1
16ae8jdka1a:10-140Ribosomal_L143174 → 3174.1 → 3174.1.1
17AAe8jdkAA1AA:16-151Ribosomal_S112484 → 2484.1 → 2484.1.1
18ABe8jdkAB1AB:4-99Ribosomal_S19838 → 838.1 → 838.1.1
19ACe8jdkAC1AC:6-146Ribosomal_S9212 → 212.1 → 212.1.1
20ADe8jdkAD1AD:2-122Ribosomal_S17e101 → 101.1 → 101.1.17
21AEe8jdkAE1AE:6-142Ribosomal_S13102 → 102.2 → 102.2.1
22AFe8jdkAF1AF:4-144Ribosomal_S19e101 → 101.1 → 101.1.2
23AGe8jdkAG1AG:18-118Ribosomal_S10304 → 304.44 → 304.44.1
24AHe8jdkAH1AH:1-82Ribosomal_S21e3167 → 3167.1 → 3167.1.1
25AIe8jdkAI1AI:68-130Ribosomal_S84988 → 4988.1 → 4988.1.1
26AIe8jdkAI2AI:2-67Ribosomal_S8320 → 320.2 → 320.2.1
27AJe8jdkAJ1AJ:7-140Ribosom_S12_S232 → 2.1 → 2.1.1
28AKe8jdkAK1AK:4-125Ribosomal_S24e304 → 304.109 → 304.109.1
29ALe8jdkAL1AL:41-115Ribosomal_S25101 → 101.1 → 101.1.2
30AMe8jdkAM1AM:2-99Ribosomal_S26e377 → 377.1 → 377.1.1
31ANe8jdkAN1AN:2-84Ribosomal_S27e375 → 375.1 → 375.1.1
32AOe8jdkAO1AO:5-68Ribosomal_S28e2 → 2.1 → 2.1.1
33APe8jdkAP1AP:4-56Ribosomal_S14377 → 377.1 → 377.1.1
34AQe8jdkAQ1AQ:6-56Ribosomal_S303168 → 3168.1 → 3168.1.1
35ARe8jdkAR1AR:2-314WD405 → 5.1 → 5.1.4
36be8jdkb1b:1-63Ribosomal_L24e377 → 377.1 → 377.1.1
37ce8jdkc1c:38-156Ribosomal_L23,Ribosomal_L23eN304 → 304.109 → 304.109.1
38de8jdkd1d:1-134KOW, Ribosomal_L264 → 4.1 → 4.1.1
39ee8jdke1e:2-136KOW,Ribosomal_L27e4 → 4.1 → 4.1.1
40fe8jdkf1f:2-148Ribosomal_L27A2490 → 2490.3 → 2490.3.1
41ge8jdkg1g:2-50Ribosomal_L29e3212 → 3212.1 → 3212.1.1
42Ge8jdkG1G:2-96Ribosomal_L22 → 2.1 → 2.1.1
43Ge8jdkG2G:97-245Ribosomal_L2_C4 → 4.1 → 4.1.1
44he8jdkh1h:13-106Ribosomal_L7Ae301 → 301.1 → 301.1.1
45He8jdkH1H:2-375Ribosomal_L31 → 1.1 → 1.1.7
46ie8jdki1i:18-124Ribosomal_L31e259 → 259.1 → 259.1.1
47Ie8jdkI1I:3-297Ribosomal_L47559 → 7559.1 → 7559.1.1
48Ie8jdkI2I:298-366Ribos_L4_asso_C3319 → 3319.1 → 3319.1.1
49je8jdkj1j:2-129Ribosomal_L32e2490 → 2490.1 → 2490.1.1
50Je8jdkJ1J:8-297Ribosomal_L18_c,Ribosomal_L5e2484 → 2484.1 → 2484.1.1
51ke8jdkk1k:2-110Ribosomal_L35Ae1 → 1.1 → 1.1.7
52Ke8jdkK1K:131-288Ribosomal_L6e4 → 4.1 → 4.1.1
53le8jdkl1l:3-103Ribosomal_L34e377 → 377.12 → 377.12.1
54Le8jdkL1L:15-248Ribosomal_L30,Ribosomal_L30_N887 → 887.1 → 887.1.1
55me8jdkm1m:2-123Ribosomal_L29192 → 192.4 → 192.4.1
56Me8jdkM1M:29-263Ribosomal_L7Ae301 → 301.1 → 301.1.1
57ne8jdkn1n:2-103Ribosomal_L36e3166 → 3166.1 → 3166.1.1
58Ne8jdkN1N:1-87Ribosomal_L6318 → 318.1 → 318.1.1
59Ne8jdkN2N:88-190Ribosomal_L6318 → 318.1 → 318.1.1
60oe8jdko1o:2-86Ribosomal_L37e375 → 375.1 → 375.1.1
61Oe8jdkO1O:2-214Ribosomal_L16325 → 325.1 → 325.1.5
62pe8jdkp1p:2-61Ribosomal_L38e896 → 896.1 → 896.1.1
63Pe8jdkP1P:9-178Ribosomal_L5,Ribosomal_L5_C882 → 882.1 → 882.1.1
64qe8jdkq1q:2-51Ribosomal_L39585 → 585.1 → 585.1.1
65Qe8jdkQ1Q:16-193Ribosomal_L13e3210 → 3210.1 → 3210.1.1
66re8jdkr1r:77-128Ribosomal_L40e375 → 375.1 → 375.1.1
67Re8jdkR1R:2-141KOW,Ribosomal_L14e4 → 4.1 → 4.1.1
68Se8jdkS1S:2-204Ribosomal_L15e304 → 304.109 → 304.109.1
69te8jdkt1t:2-105Ribosomal_L44375 → 375.1 → 375.1.1
70Te8jdkT1T:5-200Ribosomal_L132490 → 2490.2 → 2490.2.1
71ue8jdku1u:2-92Ribosomal_L37ae375 → 375.1 → 375.1.1
72Ue8jdkU1U:2-154Ribosomal_L22218 → 218.2 → 218.2.1
73ve8jdkv1v:2-131Ribosomal_L28e3209 → 3209.1 → 3209.1.1
74Ve8jdkV1V:5-188Ribosomal_L182490 → 2490.3 → 2490.3.1
75We8jdkW1W:1-56Ribosomal_L19e637 → 637.1 → 637.1.1
76We8jdkW2W:57-183Ribosomal_L19e_C3050 → 3050.1 → 3050.1.1
77xe8jdkx1x:2-219Ribosomal_S22007 → 2007.6 → 2007.6.1
78Xe8jdkX1X:73-176Ribosomal_L18A3115 → 3115.1 → 3115.1.1
79Xe8jdkX2X:4-723115.1.1.03115 → 3115.1 → 3115.1.1
80ye8jdky1y:21-113Ribosomal_S3Ae239 → 239.5 → 239.5.1
81ye8jdky2y:114-233Ribosomal_S3Ae230 → 230.6 → 230.6.1
82Ye8jdkY1Y:2-160Ribosomal_L21e4 → 4.1 → 4.1.1
83ze8jdkz1z:57-134Ribosomal_S53274 → 3274.1 → 3274.1.1
84ze8jdkz2z:202-278Ribosomal_S5_C212 → 212.1 → 212.1.1
85ze8jdkz3z:135-201Ribosomal_S5330 → 330.1 → 330.1.1
86Ze8jdkZ1Z:16-117Ribosomal_L22e3715 → 3715.1 → 3715.1.1

Visualization Legend

ECOD domains (colored by index)Unclassified protein regionsNucleic acids (RNA/DNA)Ligands/cofactors