ECODEvolutionary Classification of Protein Domains

Home Browse Search Download Help

About ECOD

ECOD (Evolutionary Classification of Protein Domains) is a hierarchical classification of protein domains based on evolutionary relationships. It combines automated sequence and structure analysis with manual curation.

Quick Links

Browse Classification
Search
Download Data
Documentation

Resources

Grishin Lab
UT Southwestern
RCSB PDB
AlphaFold DB
ecod.database@gmail.com

© 2014-2026 Grishin Lab / HHMI / UTSW

e8uhdK1 - ECOD Domain | ECOD

ECOD/Domains/e8uhdK1

e8uhdK1

UID: 005200173

PDB

Range: K:1-115
PDB: 8UHD chain K(all domains)
UniProt: Q32P79 (all domains)
Gene: POLR2J

Molecule: DNA-directed RNA polymerase II subunit RPB11 (RNA polymerase II subunit B11) (DNA-directed RNA polymerase II subunit J)

3D Structure

Loading viewer...

Related Domains

Browse other domains in RNA_pol_L_2 →

Classification

AArchitecturea+b two layers(a.11)

XX-groupDCoH-like(305)

HH-groupRBP11-like subunits of RNA polymerase(305.1)

TT-groupRBP11-like subunits of RNA polymerase(305.1.1)

FFamilyRNA_pol_L_2(305.1.1.2)

Pfam Families

PF13656RNA_pol_L_2

RNA polymerase Rpb3/Rpb11 dimerisation domain

ClanCL0509RBP11-like

External Links

ECOD PDB View: 8UHD RCSB PDB: 8UHD PDBe: 8UHD UniProt: Q32P79

Downloads

Download Domain PDB Download Domain FASTA Full PDB Structure