ECODEvolutionary Classification of Protein Domains

Home Browse Search Download Help

About ECOD

ECOD (Evolutionary Classification of Protein Domains) is a hierarchical classification of protein domains based on evolutionary relationships. It combines automated sequence and structure analysis with manual curation.

Quick Links

Browse Classification
Search
Download Data
Documentation

Resources

Grishin Lab
UT Southwestern
RCSB PDB
AlphaFold DB
ecod.database@gmail.com

© 2014-2026 Grishin Lab / HHMI / UTSW

e8waqR3 - ECOD Domain | ECOD

ECOD/Domains/e8waqR3

e8waqR3

UID: 005218788

PDB

Range: R:7-54
PDB: 8WAQ chain R(all domains)
UniProt: Q00403 (all domains)
Gene: GTF2B

Molecule: Transcription initiation factor IIB (EC 2.3.1.48) (General transcription factor TFIIB) (S300-II)

3D Structure

Loading viewer...

Related Domains

Browse other domains in TF_Zn_Ribbon →

Classification

AArchitecturefew secondary structure elements(a.19)

XX-groupRubredoxin-like(375)

HH-groupRubredoxin-related(375.1)

TT-groupRubredoxin-related(375.1.1)

FFamilyTF_Zn_Ribbon(375.1.1.37)

Pfam Families

PF08271Zn_Ribbon_TF

TFIIB zinc-binding

ClanCL0167Zn_Beta_Ribbon

External Links

ECOD PDB View: 8WAQ RCSB PDB: 8WAQ PDBe: 8WAQ UniProt: Q00403

Downloads

Download Domain PDB Download Domain FASTA Full PDB Structure