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PDB 8WAQ

ELECTRON MICROSCOPY0 chains73 ECOD domains
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3D Structure(domains colored, ligands/nucleic acids shown)

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Domains by Chain

All Domains (73)

#ChainDomain IDRangeFamilyClassification
10e8waq010:1-69zf-C3HC4_5376 → 376.1 → 376.1.1
20e8waq020:70-149MAT1386 → 386.1 → 386.1.1
32e8waq212:54-241Ssl12006 → 2006.1 → 2006.1.6
43e8waq313:5-72,3:100-231Tfb42006 → 2006.1 → 2006.1.6
54e8waq414:388-459Tfb2_C4340 → 4340.1 → 4340.1.1
65e8waq515:1-62Tfb54340 → 4340.1 → 4340.1.1
76e8waq616:493-718Helicase_C, ERCC3_RAD25_C2004 → 2004.1 → 2004.1.1
86e8waq626:244-492ResIII2004 → 2004.1 → 2004.1.1
97e8waq717:11-243DEAD_22004 → 2004.1 → 2004.1.1
10Ae8waqA1A:795-880DUF3591101 → 101.1 → 101.1.2
11Ae8waqA2A:588-794,A:881-971,A:1054-1083DUF359159 → 59.1 → 59.1.4
12Ae8waqA3A:36-86TBP-binding575 → 575.1 → 575.1.1
13Be8waqB1B:255-648TAF2_3rd2498 → 2498.1 → 2498.1.1
14Be8waqB2B:27-88,B:125-254Peptidase_M1_N4081 → 4081.1 → 4081.1.1
15Be8waqB3B:649-976TPR_TAF2_C109 → 109.4 → 109.4.1
16ce8waqc1c:1-72Bromo_TP148 → 148.1 → 148.1.1
17ee8waqe1e:417-799WD405 → 5.1 → 5.1.5
18ee8waqe2e:202-343,e:363-380TFIID_NTD24320 → 4320.1 → 4320.1.1
19Ee8waqE1E:417-799WD405 → 5.1 → 5.1.5
20Ee8waqE2E:202-343,E:363-380TFIID_NTD24320 → 4320.1 → 4320.1.1
21fe8waqf1f:217-436TAF6_C109 → 109.4 → 109.4.1
22Fe8waqF1F:217-436TAF6_C109 → 109.4 → 109.4.1
23Ge8waqG1G:11-106,G:128-154TAFII55_N59 → 59.1 → 59.1.4
24je8waqj1j:113-208TFIID_30kDa148 → 148.1 → 148.1.1
25Je8waqJ1J:113-208TFIID_30kDa148 → 148.1 → 148.1.1
26ke8waqk1k:113-201TAFII28148 → 148.1 → 148.1.1
27le8waql1l:55-128TFIID_20kDa148 → 148.1 → 148.1.1
28Le8waqL1L:55-128TFIID_20kDa148 → 148.1 → 148.1.1
29me8waqm1m:31-75TFIID-18kDa148 → 148.1 → 148.1.1
30oe8waqo1o:686-894RNA_pol_Rpb1_5,RNA_pol_Rpb1_44958 → 4958.1 → 4958.1.1
31oe8waqo2o:895-1082RNA_pol_Rpb1_64957 → 4957.1 → 4957.1.1
32oe8waqo3o:534-685RNA_pol_Rpb1_34959 → 4959.1 → 4959.1.1
33oe8waqo4o:1152-1308RNA_pol_Rpb1_74955 → 4955.1 → 4955.1.1
34oe8waqo5o:364-533RNA_pol_Rpb1_21 → 1.1 → 1.1.2
35oe8waqo6o:1083-1135,o:1361-1415,o:1469-1484RNA_pol_Rpb1_54954 → 4954.1 → 4954.1.1
36oe8waqo7o:1136-1151,o:1309-13604956.1.1.04956 → 4956.1 → 4956.1.1
37Oe8waqO1O:1-53TFIIA_gamma_N104 → 104.1 → 104.1.1
38Oe8waqO2O:54-99TFIIA_gamma_C74 → 74.1 → 74.1.1
39pe8waqp1p:529-618RNA_pol_Rpb2_44961 → 4961.1 → 4961.1.1
40pe8waqp2p:16-67,p:87-200,p:392-528RNA_pol_Rpb2_1,RNA_pol_Rpb2_34010 → 4010.1 → 4010.1.1
41pe8waqp3p:806-929RNA_pol_Rpb2_6325 → 325.1 → 325.1.7
42pe8waqp4p:1054-1174RNA_pol_Rpb2_6,RNA_pol_Rpb2_74043 → 4043.1 → 4043.1.1
43pe8waqp5p:769-805,p:930-1053RNA_pol_Rpb2_61 → 1.1 → 1.1.2
44pe8waqp6p:619-7684042.1.1.04042 → 4042.1 → 4042.1.1
45pe8waqp7p:201-391RNA_pol_Rpb2_24041 → 4041.1 → 4041.1.1
46Pe8waqP1P:159-255TBP331 → 331.1 → 331.1.1
47Pe8waqP2P:256-338TBP331 → 331.1 → 331.1.1
48qe8waqq1q:2-42,q:179-271RNA_pol_L305 → 305.1 → 305.1.1
49qe8waqq2q:43-178RNA_pol_A_bac240 → 240.2 → 240.2.1
50Qe8waqQ1Q:322-376TFIIA74 → 74.1 → 74.1.1
51Qe8waqQ2Q:9-51,Q:308-321TFIIA104 → 104.1 → 104.1.1
52re8waqr1r:14-142RNA_pol_Rpb4102 → 102.1 → 102.1.1
53Re8waqR1R:208-316TFIIB101 → 101.1 → 101.1.10
54Re8waqR2R:105-207TFIIB101 → 101.1 → 101.1.10
55Re8waqR3R:7-54TF_Zn_Ribbon375 → 375.1 → 375.1.1
56se8waqs1s:139-210RNA_pol_Rpb5_C840 → 840.1 → 840.1.1
57se8waqs2s:2-138RNA_pol_Rpb5_N2008 → 2008.3 → 2008.3.1
58Se8waqS1S:5-54,S:93-180TFIIF_alpha59 → 59.1 → 59.1.1
59te8waqt1t:46-127RNA_pol_Rpb6152 → 152.1 → 152.1.1
60Te8waqT1T:2-119TFIIF_beta_N59 → 59.1 → 59.1.1
61Te8waqT2T:175-238TFIIF_beta101 → 101.1 → 101.1.2
62ue8waqu1u:79-171S12 → 2.1 → 2.1.1
63ue8waqu2u:1-77SHS2_Rpb7-N872 → 872.1 → 872.1.1
64Ue8waqU1U:101-174TF_Zn_Ribbon375 → 375.1 → 375.1.1
65Ue8waqU2U:11-100,U:175-204TFIIE_alpha101 → 101.1 → 101.1.2
66ve8waqv1v:1-150RNA_pol_Rpb82 → 2.1 → 2.1.1
67Ve8waqV1V:147-206TFA2_Winged_2101 → 101.1 → 101.1.2
68Ve8waqV2V:75-146TFIIE_beta101 → 101.1 → 101.1.2
69we8waqw1w:1-59RNA_POL_M_15KD375 → 375.1 → 375.1.1
70we8waqw2w:60-125TFIIS_C375 → 375.1 → 375.1.1
71xe8waqx1x:1-67RNA_pol_N101 → 101.4 → 101.4.1
72ye8waqy1y:1-115RNA_pol_L_2305 → 305.1 → 305.1.1
73ze8waqz1z:15-58DNA_RNApol_7kD375 → 375.1 → 375.1.1

Visualization Legend

ECOD domains (colored by index)Unclassified protein regionsNucleic acids (RNA/DNA)Ligands/cofactors