ECODEvolutionary Classification of Protein Domains

Home Browse Search Download Help

About ECOD

ECOD (Evolutionary Classification of Protein Domains) is a hierarchical classification of protein domains based on evolutionary relationships. It combines automated sequence and structure analysis with manual curation.

Quick Links

Browse Classification
Search
Download Data
Documentation

Resources

Grishin Lab
UT Southwestern
RCSB PDB
AlphaFold DB
ecod.database@gmail.com

© 2014-2026 Grishin Lab / HHMI / UTSW

e8ydjNA6 - ECOD Domain | ECOD

ECOD/Domains/e8ydjNA6

e8ydjNA6

UID: 005238348

PDB

Range: NA:279-346
PDB: 8YDJ chain NA(all domains)
UniProt: P0AFF6 (all domains)
Gene: nusA

Molecule: Transcription termination/antitermination protein NusA (N utilization substance protein A) (Transcription termination/antitermination L factor)

3D Structure

Loading viewer...

Related Domains

Browse other domains in KH_NusA_2nd →

Classification

AArchitecturea+b two layers(a.11)

XX-groupAlpha-lytic protease prodomain-like(327)

HH-groupKH-domains(327.11)

TT-groupProkaryotic type KH domain (KH-domain type II)(327.11.1)

FFamilyKH_NusA_2nd(327.11.1.7)

Pfam Families

PF26594KH_NusA_2nd

NusA-like second KH domain

ClanCL0007KH

External Links

ECOD PDB View: 8YDJ RCSB PDB: 8YDJ PDBe: 8YDJ UniProt: P0AFF6

Downloads

Download Domain PDB Download Domain FASTA Full PDB Structure