ECODEvolutionary Classification of Protein Domains

Home Browse Search Download Help

About ECOD

ECOD (Evolutionary Classification of Protein Domains) is a hierarchical classification of protein domains based on evolutionary relationships. It combines automated sequence and structure analysis with manual curation.

Quick Links

Browse Classification
Search
Download Data
Documentation

Resources

Grishin Lab
UT Southwestern
RCSB PDB
AlphaFold DB
ecod.database@gmail.com

© 2014-2026 Grishin Lab / HHMI / UTSW

e9fmdA4 - ECOD Domain | ECOD

ECOD/Domains/e9fmdA4

e9fmdA4

UID: 005282456

PDB

Range: A:1755-2006
PDB: 9FMD chain A(all domains)
UniProt: Q6P2Q9 (all domains)
Gene: PRPF8

Molecule: Pre-mRNA-processing-splicing factor 8 (220 kDa U5 snRNP-specific protein) (PRP8 homolog) (Splicing factor Prp8) (p220)

3D Structure

Loading viewer...

Related Domains

Browse other domains in PRP8_domainIV →

Classification

AArchitecturemixed a+b and a/b(a.18)

XX-groupRibonuclease H-like(2484)

HH-groupRibonuclease H-like(2484.1)

TT-groupRibonuclease H-like(2484.1.1)

FFamilyPRP8_domainIV(2484.1.1.62)

Pfam Families

PF12134PRP8_domainIV

PRP8 domain IV core

ClanCL0219RNase_H

External Links

ECOD PDB View: 9FMD RCSB PDB: 9FMD PDBe: 9FMD UniProt: Q6P2Q9

Downloads

Download Domain PDB Download Domain FASTA Full PDB Structure