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PDB 9FMD

0 chains79 ECOD domains
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3D Structure(domains colored, ligands/nucleic acids shown)

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Domains by Chain

All Domains (79)

#ChainDomain IDRangeFamilyClassification
17e9fmd717:243-411Helicase_C2004 → 2004.1 → 2004.1.1
27e9fmd727:22-242DEAD2004 → 2004.1 → 2004.1.1
38e9fmd818:64-154RRM_1304 → 304.9 → 304.9.1
49e9fmd919:3-143Mago_nashi861 → 861.1 → 861.1.1
5ae9fmda1a:4-75LSM4 → 4.1 → 4.1.1
6Ae9fmdA1A:26-810PRO8NT,PROCN1038 → 1038.1 → 1038.1.1
7Ae9fmdA2A:811-1182RRM_4304 → 304.48 → 304.48.1
8Ae9fmdA3A:1183-1502U6-snRNA_bdg,U5_2-snRNA_bdg4967 → 4967.1 → 4967.1.1
9Ae9fmdA4A:1755-2006PRP8_domainIV2484 → 2484.1 → 2484.1.1
10Ae9fmdA5A:1503-1754U6-snRNA_bdg2008 → 2008.1 → 2008.1.1
11Ae9fmdA6A:2067-2314JAB,PROCT2492 → 2492.1 → 2492.1.1
12be9fmdb1b:7-95LSM4 → 4.1 → 4.1.1
13Be9fmdB1B:1312-1520DEAD2004 → 2004.1 → 2004.1.1
14Be9fmdB2B:683-886Helicase_C2004 → 2004.1 → 2004.1.1
15Be9fmdB3B:1825-1957Sec634156 → 4156.1 → 4156.1.1
16Be9fmdB4B:433-682DEAD2004 → 2004.1 → 2004.1.1
17Be9fmdB5B:2016-2125Sec6311 → 11.1 → 11.1.1
18Be9fmdB6B:1723-1824SNRNP200_wHTH101 → 101.1 → 101.1.2
19Be9fmdB7B:887-993SNRNP200_wHTH101 → 101.1 → 101.1.2
20Be9fmdB8B:994-1125Sec634156 → 4156.1 → 4156.1.1
21Be9fmdB9B:1958-2015102.5.1.0102 → 102.5 → 102.5.1
22Be9fmdB10B:1521-1722Helicase_C2004 → 2004.1 → 2004.1.1
23Be9fmdB11B:1181-1311Sec6311 → 11.1 → 11.1.1
24Be9fmdB12B:1126-1180102.5.1.0102 → 102.5 → 102.5.1
25ce9fmdc1c:2-81LSM4 → 4.1 → 4.1.1
26Ce9fmdC1C:829-957EFG_C304 → 304.24 → 304.24.1
27Ce9fmdC2C:581-659EFG_III304 → 304.24 → 304.24.1
28Ce9fmdC3C:660-828EFG_IV212 → 212.1 → 212.1.1
29Ce9fmdC4C:114-439GTP_EFTU2004 → 2004.1 → 2004.1.1
30Ce9fmdC5C:440-580GTP_EFTU_D21 → 1.1 → 1.1.7
31de9fmdd1d:26-73,d:93-118LSM4 → 4.1 → 4.1.1
32De9fmdD1D:39-94Isy1192 → 192.13 → 192.13.1
33ee9fmde1e:18-92LSM4 → 4.1 → 4.1.1
34Ee9fmdE1E:62-355WD40, Beta-prop_NOL10_N5 → 5.1 → 5.1.4
35fe9fmdf1f:7-81LSM4 → 4.1 → 4.1.1
36ge9fmdg1g:4-76LSM4 → 4.1 → 4.1.1
37he9fmdh1h:4-75LSM4 → 4.1 → 4.1.1
38He9fmdH1H:452-647MA3109 → 109.4 → 109.4.1
39He9fmdH2H:149-345,H:450-451MIF4G109 → 109.4 → 109.4.1
40ie9fmdi1i:7-95LSM4 → 4.1 → 4.1.1
41Ie9fmdI1I:33-738TPR_8, HAT_Syf1_M, HAT_Syf1_CNRKL1_C, HAT_Syf1_CNRKL1_N, HAT_PRP39_N109 → 109.4 → 109.4.1
42je9fmdj1j:2-81LSM4 → 4.1 → 4.1.1
43Je9fmdJ1J:214-802HAT, HAT_Syf1_CNRKL1_C, HAT_Syf1_CNRKL1_N, HAT_PRP39_C, PF29376109 → 109.4 → 109.4.1
44ke9fmdk1k:26-73,k:93-118LSM4 → 4.1 → 4.1.1
45le9fmdl1l:18-92LSM4 → 4.1 → 4.1.1
46Le9fmdL1L:8-64Myb_DNA-binding101 → 101.1 → 101.1.1
47Le9fmdL2L:62-110Myb_DNA-binding101 → 101.1 → 101.1.1
48me9fmdm1m:7-81LSM4 → 4.1 → 4.1.1
49ne9fmdn1n:4-76LSM4 → 4.1 → 4.1.1
50Ne9fmdN1N:3-144BUD313952 → 3952.1 → 3952.1.1
51oe9fmdo1o:2-163LRR_9207 → 207.1 → 207.1.1
52Oe9fmdO1O:227-308RRM_1304 → 304.9 → 304.9.1
53Oe9fmdO2O:19-89STL11_N376 → 376.1 → 376.1.3
54Oe9fmdO3O:90-218zf-CCCH_RBM22906 → 906.1 → 906.1.1
55pe9fmdp1p:3-96RRM_1304 → 304.9 → 304.9.1
56qe9fmdq1q:68-134,q:195-504WD40, Prp19, WD40_Prp195 → 5.1 → 5.1.4
57Qe9fmdQ1Q:19-415Aquarius_N_1st109 → 109.4 → 109.4.1
58Qe9fmdQ2Q:1135-1333AAA_122004 → 2004.1 → 2004.1.1
59Qe9fmdQ3Q:416-492,Q:660-706,Q:795-1134ResIII, AAA_112004 → 2004.1 → 2004.1.1
60Qe9fmdQ4Q:493-659Aquarius_N_2nd1 → 1.1 → 1.1.7
61Qe9fmdQ5Q:707-753,Q:773-794Aquarius_N_3rd3940 → 3940.1 → 3940.1.1
62re9fmdr1r:68-134,r:195-504WD40, Prp19, WD40_Prp195 → 5.1 → 5.1.4
63se9fmds1s:68-134,s:195-504WD40, Prp19, WD40_Prp195 → 5.1 → 5.1.4
64Se9fmdS1S:3-166Pro_isomerase75 → 75.1 → 75.1.1
65te9fmdt1t:68-134,t:195-504WD40, Prp19, WD40_Prp195 → 5.1 → 5.1.4
66Te9fmdT1T:184-496WD405 → 5.1 → 5.1.4
67Ue9fmdU1U:62-1967101.1.1.07101 → 7101.1 → 7101.1.1
68Ue9fmdU2U:265-371Slu77101 → 7101.1 → 7101.1.1
69Ve9fmdV1V:260-355,V:609-610,V:800-805S12 → 2.1 → 2.1.1
70Ve9fmdV2V:566-608,V:611-743DEAD2004 → 2004.1 → 2004.1.1
71Ve9fmdV3V:744-799,V:806-911,V:914-917Helicase_C2004 → 2004.1 → 2004.1.1
72Ve9fmdV4V:912-913,V:918-975,V:977-987HA2_N101 → 101.1 → 101.1.2
73Ve9fmdV5V:961-1108HA2_N,HA2_C4156 → 4156.1 → 4156.1.1
74Ve9fmdV6V:1109-1183OB_NTP_bind2 → 2.1 → 2.1.1
75we9fmdw1w:489-646Pro_isomerase75 → 75.1 → 75.1.1
76we9fmdw2w:102-433WD405 → 5.1 → 5.1.5
77We9fmdW1W:273-579WD405 → 5.1 → 5.1.4
78ye9fmdy1y:142-299Pro_isomerase75 → 75.1 → 75.1.1
79ye9fmdy2y:7-82RRM_1304 → 304.9 → 304.9.1

Visualization Legend

ECOD domains (colored by index)Unclassified protein regionsNucleic acids (RNA/DNA)Ligands/cofactors