ECODEvolutionary Classification of Protein Domains

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About ECOD

ECOD (Evolutionary Classification of Protein Domains) is a hierarchical classification of protein domains based on evolutionary relationships. It combines automated sequence and structure analysis with manual curation.

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e9fmdJ1 - ECOD Domain | ECOD

ECOD/Domains/e9fmdJ1

e9fmdJ1

UID: 005282490

PDB

Range: J:214-802
PDB: 9FMD chain J(all domains)
UniProt: Q9BZJ0 (all domains)
Gene: CRNKL1

Molecule: Crooked neck-like protein 1 (Crooked neck homolog) (hCrn)

3D Structure

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Related Domains

Browse other domains in HAT, HAT_Syf1_CNRKL1_C, HAT_Syf1_CNRKL1_N, HAT_PRP39_C, PF29376 →

Classification

AArchitecturealpha superhelices(a.9)

XX-groupRepetitive alpha hairpins(109)

HH-groupARM repeat(109.4)

TT-groupARM repeat(109.4.1)

FFamilyHAT, HAT_Syf1_CNRKL1_C, HAT_Syf1_CNRKL1_N, HAT_PRP39_C, PF29376(109.4.1.1397)

Pfam Families

HAT (Half-A-TPR) repeat

ClanCL0020TPR

PF23231HAT_Syf1_CNRKL1_C

Pre-mRNA-splicing factor Syf1/CRNKL1 C-terminal HAT repeat

ClanCL0020TPR

PF23233HAT_Syf1_CNRKL1_N

Pre-mRNA-splicing factor Syf1/CNRKL1 N-terminal HAT repeat

ClanCL0020TPR

PF23241HAT_PRP39_C

PRP39 C-terminal HAT repeat

External Links

ECOD PDB View: 9FMD RCSB PDB: 9FMD PDBe: 9FMD UniProt: Q9BZJ0

Downloads

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TPR

PF29376PRP6_TPR

PRP6, TPR-like domain

ClanCL0020TPR