ECODEvolutionary Classification of Protein Domains

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ECOD (Evolutionary Classification of Protein Domains) is a hierarchical classification of protein domains based on evolutionary relationships. It combines automated sequence and structure analysis with manual curation.

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e4r1rC2 - ECOD Domain | ECOD

ECOD/Domains/e4r1rC2

e4r1rC2

UID: 000096366

PDB

Range: C:222-737
PDB: 4R1R chain C(all domains)
UniProt: P00452 (all domains)
Gene: nrdA

Molecule: RIBONUCLEOTIDE REDUCTASE R1 PROTEIN

3D Structure

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Related Domains

Browse other domains in Ribonuc_red_lgC →

Classification

AArchitecturea/b barrels(a.16)

XX-groupTen stranded beta/alpha barrel(2500)

HH-groupTen stranded beta/alpha barrel(2500.1)

TT-groupTen stranded beta/alpha barrel(2500.1.1)

FFamilyRibonuc_red_lgC(2500.1.1.2)

Ligands

in contact, ≤ 4 Å

Guanosine-5'-DiphosphateGDP
drugDrugBank DB04315
Thymidine 5'-triphosphateTTP
drugDrugBank DB02452

Shown in the structure viewer.

Pfam Families

PF02867Ribonuc_red_lgC

Ribonucleotide reductase, barrel domain

ClanCL0339PFL-like

External Links

ECOD PDB View: 4R1R RCSB PDB: 4R1R PDBe: 4R1R UniProt: P00452

Downloads

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Drug annotations from DrugDomain.