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PDB 2YBB

ELECTRON MICROSCOPY0 chains66 ECOD domains
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3D Structure(domains colored, ligands/nucleic acids shown)

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Domains by Chain

All Domains (66)

#ChainDomain IDRangeFamilyClassification
11e2ybb111:334-438NADH_4Fe-4S633 → 633.11 → 633.11.1
21e2ybb121:250-333SLBB221 → 221.1 → 221.1.4
31e2ybb131:2-249Complex1_51K4335 → 4335.1 → 4335.1.1
42e2ybb212:75-1802Fe-2S_thioredx2485 → 2485.1 → 2485.1.1
52e2ybb222:2-742Fe-2S_thioredx3697 → 3697.1 → 3697.1.1
63e2ybb343:1-95Fer2_4221 → 221.1 → 221.1.1
73e2ybb373:162-246Nqo3_Fer4205 → 205.1 → 205.1.1
83e2ybb383:686-777Molydop_binding1 → 1.1 → 1.1.2
93e2ybb393:96-161NADH-G_4Fe-4S_35100 → 5100.1 → 5100.1.1
103e2ybb353:375-5412003.2.1.02003 → 2003.2 → 2003.2.1
113e2ybb363:305-379,3:542-685Molybdopterin2003 → 2003.2 → 2003.2.1
123e2ybb3103:247-304Molybdop_Fe4S41001 → 1001.1 → 1001.1.1
134e2ybb414:107-304Complex1_49kDa4025 → 4025.1 → 4025.1.1
144e2ybb424:25-63,4:378-409Complex1_49kDa244 → 244.4 → 244.4.1
154e2ybb434:64-106,4:305-377Complex1_49kDa244 → 244.4 → 244.4.1
165e2ybb515:1-196Complex1_30kDa4272 → 4272.1 → 4272.1.1
176e2ybb616:15-175Oxidored_q62007 → 2007.1 → 2007.1.3
187e2ybb717:3-129NADH_Oxid_Nqo15241 → 241.2 → 241.2.1
198e2ybb818:26-179Fer4+Fer4_7205 → 205.1 → 205.1.1
20ae2ybba1a:1-233Peptidase_M16,Peptidase_M16_C309 → 309.1 → 309.1.1
21ae2ybba2a:234-443Peptidase_M16_C309 → 309.1 → 309.1.1
22Ae2ybbA1A:1-233Peptidase_M16,Peptidase_M16_C309 → 309.1 → 309.1.1
23Ae2ybbA2A:234-443Peptidase_M16_C309 → 309.1 → 309.1.1
24be2ybbb1b:12-235Peptidase_M16309 → 309.1 → 309.1.1
25be2ybbb2b:236-439Peptidase_M16_C309 → 309.1 → 309.1.1
26Be2ybbB1B:17-235Peptidase_M16309 → 309.1 → 309.1.1
27Be2ybbB2B:236-439Peptidase_M16_C309 → 309.1 → 309.1.1
28ce2ybbc1c:261-379Cytochrom_B_C5068 → 5068.1 → 5068.1.1
29ce2ybbc2c:10-260Cytochrome_B, Cytochrom_B_N_25069 → 5069.1 → 5069.1.1
30Ce2ybbC1C:15-260Cytochrome_B, Cytochrom_B_N_25069 → 5069.1 → 5069.1.1
31Ce2ybbC2C:261-379Cytochrom_B_C5068 → 5068.1 → 5068.1.1
32de2ybbd1d:1-195Cytochrom_C1107 → 107.1 → 107.1.1
33de2ybbd2d:196-2415013.1.1.05013 → 5013.1 → 5013.1.1
34De2ybbD1D:1-195Cytochrom_C1107 → 107.1 → 107.1.1
35De2ybbD2D:196-2415013.1.1.05013 → 5013.1 → 5013.1.1
36ee2ybbe2e:1-69UCR_TM5014 → 5014.1 → 5014.1.1
37ee2ybbe3e:70-196Rieske66 → 66.1 → 66.1.1
38Ee2ybbE2E:1-69UCR_TM5014 → 5014.1 → 5014.1.1
39Ee2ybbE3E:70-196Rieske66 → 66.1 → 66.1.1
40fe2ybbf1f:12-110UCR_14kD5070 → 5070.1 → 5070.1.1
41Fe2ybbF1F:12-110UCR_14kD5070 → 5070.1 → 5070.1.1
42ge2ybbg1g:1-76UcrQ5016 → 5016.1 → 5016.1.1
43Ge2ybbG1G:1-75UcrQ5016 → 5016.1 → 5016.1.1
44he2ybbh1h:13-78UCR_hinge5071 → 5071.1 → 5071.1.1
45He2ybbH1H:13-78UCR_hinge5071 → 5071.1 → 5071.1.1
46ie2ybbi1i:32-78Ubiq-Cytc-red_N852 → 852.1 → 852.1.1
47Ie2ybbI1I:32-78Ubiq-Cytc-red_N852 → 852.1 → 852.1.1
48je2ybbj1j:1-62UCR_UQCRX_QCR95017 → 5017.1 → 5017.1.1
49Je2ybbJ1J:1-62UCR_UQCRX_QCR95017 → 5017.1 → 5017.1.1
50ke2ybbk1k:15-36UCR_6-4kD5018 → 5018.1 → 5018.1.1
51Ke2ybbK1K:15-36UCR_6-4kD5018 → 5018.1 → 5018.1.1
52Le2ybbL1L:1-514COX15038 → 5038.1 → 5038.1.1
53Me2ybbM1M:1-90COX2_TM5040 → 5040.1 → 5040.1.1
54Me2ybbM2M:91-227COX23156 → 3156.1 → 3156.1.1
55Ne2ybbN1N:1-261COX35039 → 5039.1 → 5039.1.1
56Oe2ybbO1O:4-147COX45003 → 5003.1 → 5003.1.1
57Pe2ybbP1P:1-109COX5A109 → 109.7 → 109.7.1
58Qe2ybbQ1Q:1-98COX5B375 → 375.1 → 375.1.8
59Re2ybbR1R:1-84COX6A5004 → 5004.1 → 5004.1.1
60Se2ybbS1S:11-85COX6B540 → 540.1 → 540.1.1
61Te2ybbT1T:1-73COX6C5005 → 5005.1 → 5005.1.1
62Ue2ybbU1U:1-57COX7a5006 → 5006.1 → 5006.1.1
63Ve2ybbV1V:6-54COX7B5007 → 5007.1 → 5007.1.1
64We2ybbW1W:1-47COX7C5008 → 5008.1 → 5008.1.1
65Xe2ybbX1X:1-43COX85009 → 5009.1 → 5009.1.1
66Ye2ybbY1Y:1-104Cytochrom_C107 → 107.1 → 107.1.1

Visualization Legend

ECOD domains (colored by index)Unclassified protein regionsNucleic acids (RNA/DNA)Ligands/cofactors