Home/PDB

PDB 4V88

X-RAY DIFFRACTION3.00 Å0 chains179 ECOD domains
View in RCSB PDB

3D Structure(domains colored, ligands/nucleic acids shown)

Loading viewer...

Domains by Chain

All Domains (179)

#ChainDomain IDRangeFamilyClassification
1Aae4v88Aa1Aa:2-98Ribosomal_S26e377 → 377.1 → 377.1.1
2AAe4v88AA1AA:2-207Ribosomal_S22007 → 2007.6 → 2007.6.1
3Abe4v88Ab1Ab:2-82Ribosomal_S27e375 → 375.1 → 375.1.1
4ABe4v88AB1AB:114-233Ribosomal_S3Ae230 → 230.6 → 230.6.1
5ABe4v88AB2AB:20-113Ribosomal_S3Ae239 → 239.5 → 239.5.1
6Ace4v88Ac1Ac:5-67Ribosomal_S28e2 → 2.1 → 2.1.1
7ACe4v88AC1AC:34-108Ribosomal_S53274 → 3274.1 → 3274.1.1
8ACe4v88AC2AC:176-250Ribosomal_S5_C212 → 212.1 → 212.1.1
9ACe4v88AC3AC:109-175Ribosomal_S5330 → 330.1 → 330.1.1
10Ade4v88Ad1Ad:4-56Ribosomal_S14377 → 377.1 → 377.1.1
11ADe4v88AD1AD:3-91KH_2327 → 327.11 → 327.11.1
12ADe4v88AD2AD:92-225Ribosomal_S3_C230 → 230.2 → 230.2.1
13Aee4v88Ae1Ae:2-61Ribosomal_S303168 → 3168.1 → 3168.1.1
14AEe4v88AE1AE:176-261KOW,40S_S4_C4 → 4.1 → 4.1.1
15AEe4v88AE2AE:117-175Ribosomal_S4e2 → 2.1 → 2.1.1
16AEe4v88AE3AE:2-116Ribosomal_S4e,S4,RS4NT221 → 221.1 → 221.1.2
17Afe4v88Af1Af:82-152Ribosomal_S27375 → 375.1 → 375.1.1
18AFe4v88AF1AF:20-225Ribosomal_S7167 → 167.1 → 167.1.1
19Age4v88Ag1Ag:2-319WD405 → 5.1 → 5.1.4
20AGe4v88AG1AG:1-226Ribosomal_S6e239 → 239.1 → 239.1.1
21Ahe4v88Ah1Ah:9-176HABP4_PAI-RBP13451 → 3451.1 → 3451.1.1
22AHe4v88AH1AH:4-105Ribosomal_S7e327 → 327.18 → 327.18.1
23AHe4v88AH2AH:106-187Ribosomal_S7e327 → 327.18 → 327.18.1
24AIe4v88AI1AI:2-200Ribosomal_S8e3174 → 3174.1 → 3174.1.1
25AJe4v88AJ1AJ:2-186Ribosomal_S4,S4221 → 221.1 → 221.1.2
26AKe4v88AK1AK:1-96S10_plectin101 → 101.1 → 101.1.2
27ALe4v88AL1AL:2-156Ribosomal_S17,Ribosomal_S17_N2 → 2.1 → 2.1.1
28AMe4v88AM1AM:20-143Ribosomal_L7Ae301 → 301.1 → 301.1.1
29ANe4v88AN1AN:83-151Ribosomal_S15616 → 616.1 → 616.1.1
30ANe4v88AN2AN:2-82Ribosomal_S13_N101 → 101.40 → 101.40.1
31AOe4v88AO1AO:11-137Ribosomal_S112484 → 2484.1 → 2484.1.1
32APe4v88AP1AP:8-131Ribosomal_S19838 → 838.1 → 838.1.1
33AQe4v88AQ1AQ:3-143Ribosomal_S9212 → 212.1 → 212.1.1
34ARe4v88AR1AR:2-126Ribosomal_S17e101 → 101.1 → 101.1.17
35ASe4v88AS1AS:2-146Ribosomal_S13102 → 102.2 → 102.2.1
36ATe4v88AT1AT:2-144Ribosomal_S19e101 → 101.1 → 101.1.2
37AUe4v88AU1AU:15-121Ribosomal_S10304 → 304.44 → 304.44.1
38AVe4v88AV1AV:1-87Ribosomal_S21e3167 → 3167.1 → 3167.1.1
39AWe4v88AW1AW:68-130Ribosomal_S84988 → 4988.1 → 4988.1.1
40AWe4v88AW2AW:2-67Ribosomal_S8320 → 320.2 → 320.2.1
41AXe4v88AX1AX:2-145Ribosom_S12_S232 → 2.1 → 2.1.1
42AYe4v88AY1AY:2-135Ribosomal_S24e304 → 304.109 → 304.109.1
43AZe4v88AZ1AZ:36-105Ribosomal_S25101 → 101.1 → 101.1.2
44Bae4v88Ba1Ba:2-149Ribosomal_L27A2490 → 2490.3 → 2490.3.1
45BAe4v88BA1BA:99-253Ribosomal_L2_C4 → 4.1 → 4.1.1
46BAe4v88BA2BA:2-98Ribosomal_L22 → 2.1 → 2.1.1
47Bbe4v88Bb1Bb:2-47Ribosomal_L29e3212 → 3212.1 → 3212.1.1
48BBe4v88BB1BB:2-387Ribosomal_L31 → 1.1 → 1.1.7
49Bce4v88Bc1Bc:9-105Ribosomal_L7Ae301 → 301.1 → 301.1.1
50BCe4v88BC2BC:2-269Ribosomal_L47559 → 7559.1 → 7559.1.1
51BCe4v88BC3BC:270-362Ribos_L4_asso_C3319 → 3319.1 → 3319.1.1
52Bde4v88Bd1Bd:4-112Ribosomal_L31e259 → 259.1 → 259.1.1
53BDe4v88BD1BD:2-297Ribosomal_L18_c,Ribosomal_L5e2484 → 2484.1 → 2484.1.1
54Bee4v88Be1Be:2-128Ribosomal_L32e2490 → 2490.1 → 2490.1.1
55BEe4v88BE1BE:2-109,BE:129-176Ribosomal_L6e4 → 4.1 → 4.1.1
56Bfe4v88Bf1Bf:2-107Ribosomal_L35Ae1 → 1.1 → 1.1.7
57BFe4v88BF1BF:23-244Ribosomal_L30,Ribosomal_L30_N887 → 887.1 → 887.1.1
58Bge4v88Bg1Bg:2-103Ribosomal_L34e377 → 377.12 → 377.12.1
59BGe4v88BG1BG:24-256Ribosomal_L7Ae301 → 301.1 → 301.1.1
60Bhe4v88Bh1Bh:2-120Ribosomal_L29192 → 192.4 → 192.4.1
61BHe4v88BH1BH:1-85Ribosomal_L6318 → 318.1 → 318.1.1
62BHe4v88BH2BH:86-191Ribosomal_L6318 → 318.1 → 318.1.1
63Bie4v88Bi1Bi:2-100Ribosomal_L36e3166 → 3166.1 → 3166.1.1
64BIe4v88BI1BI:2-221Ribosomal_L16325 → 325.1 → 325.1.5
65Bje4v88Bj1Bj:2-88Ribosomal_L37e375 → 375.1 → 375.1.1
66BJe4v88BJ1BJ:6-174Ribosomal_L5,Ribosomal_L5_C882 → 882.1 → 882.1.1
67Bke4v88Bk1Bk:3-73Ribosomal_L38e896 → 896.1 → 896.1.1
68Ble4v88Bl1Bl:2-51Ribosomal_L39585 → 585.1 → 585.1.1
69BLe4v88BL1BL:7-190Ribosomal_L13e3210 → 3210.1 → 3210.1.1
70Bme4v88Bm1Bm:77-128Ribosomal_L40e375 → 375.1 → 375.1.1
71BMe4v88BM1BM:3-138KOW,Ribosomal_L14e4 → 4.1 → 4.1.1
72Bne4v88Bn1Bn:1-25Ribosomal_L416069 → 6069.1 → 6069.1.1
73BNe4v88BN1BN:2-204Ribosomal_L15e304 → 304.109 → 304.109.1
74Boe4v88Bo1Bo:2-106Ribosomal_L44375 → 375.1 → 375.1.1
75BOe4v88BO1BO:3-199Ribosomal_L132490 → 2490.2 → 2490.2.1
76Bpe4v88Bp1Bp:2-92Ribosomal_L37ae375 → 375.1 → 375.1.1
77BPe4v88BP1BP:2-184Ribosomal_L22218 → 218.2 → 218.2.1
78BQe4v88BQ1BQ:2-186Ribosomal_L182490 → 2490.3 → 2490.3.1
79BRe4v88BR1BR:2-56Ribosomal_L19e637 → 637.1 → 637.1.1
80BRe4v88BR2BR:57-189Ribosomal_L19e_C3050 → 3050.1 → 3050.1.1
81BSe4v88BS1BS:70-172Ribosomal_L18A3115 → 3115.1 → 3115.1.1
82BSe4v88BS2BS:1-693115.1.1.03115 → 3115.1 → 3115.1.1
83BTe4v88BT1BT:2-160Ribosomal_L21e4 → 4.1 → 4.1.1
84BUe4v88BU1BU:9-108Ribosomal_L22e3715 → 3715.1 → 3715.1.1
85BVe4v88BV1BV:2-137Ribosomal_L143174 → 3174.1 → 3174.1.1
86BWe4v88BW1BW:1-98Ribosomal_L24e377 → 377.1 → 377.1.1
87BXe4v88BX1BX:22-142Ribosomal_L23,Ribosomal_L23eN304 → 304.109 → 304.109.1
88BYe4v88BY1BY:2-127KOW, Ribosomal_L264 → 4.1 → 4.1.1
89BZe4v88BZ1BZ:2-136Ribosomal_L27e4 → 4.1 → 4.1.1
90Cae4v88Ca1Ca:2-98Ribosomal_S26e377 → 377.1 → 377.1.1
91CAe4v88CA1CA:2-207Ribosomal_S22007 → 2007.6 → 2007.6.1
92Cbe4v88Cb1Cb:2-82Ribosomal_S27e375 → 375.1 → 375.1.1
93CBe4v88CB1CB:114-235Ribosomal_S3Ae230 → 230.6 → 230.6.1
94CBe4v88CB2CB:20-113Ribosomal_S3Ae239 → 239.5 → 239.5.1
95Cce4v88Cc1Cc:5-67Ribosomal_S28e2 → 2.1 → 2.1.1
96CCe4v88CC1CC:34-108Ribosomal_S53274 → 3274.1 → 3274.1.1
97CCe4v88CC2CC:176-250Ribosomal_S5_C212 → 212.1 → 212.1.1
98CCe4v88CC3CC:109-175Ribosomal_S5330 → 330.1 → 330.1.1
99Cde4v88Cd1Cd:4-56Ribosomal_S14377 → 377.1 → 377.1.1
100CDe4v88CD1CD:3-91KH_2327 → 327.11 → 327.11.1
101CDe4v88CD2CD:92-225Ribosomal_S3_C230 → 230.2 → 230.2.1
102Cee4v88Ce1Ce:2-63Ribosomal_S303168 → 3168.1 → 3168.1.1
103CEe4v88CE1CE:176-261KOW,40S_S4_C4 → 4.1 → 4.1.1
104CEe4v88CE2CE:117-175Ribosomal_S4e2 → 2.1 → 2.1.1
105CEe4v88CE3CE:2-116Ribosomal_S4e,S4,RS4NT221 → 221.1 → 221.1.2
106Cfe4v88Cf1Cf:102-152Ribosomal_S27375 → 375.1 → 375.1.1
107CFe4v88CF1CF:20-225Ribosomal_S7167 → 167.1 → 167.1.1
108Cge4v88Cg1Cg:2-319WD405 → 5.1 → 5.1.4
109CGe4v88CG1CG:1-218Ribosomal_S6e239 → 239.1 → 239.1.1
110Che4v88Ch1Ch:23-85,Ch:119-1743451.1.1.03451 → 3451.1 → 3451.1.1
111CHe4v88CH1CH:2-105Ribosomal_S7e327 → 327.18 → 327.18.1
112CHe4v88CH2CH:106-187Ribosomal_S7e327 → 327.18 → 327.18.1
113CIe4v88CI1CI:2-200Ribosomal_S8e3174 → 3174.1 → 3174.1.1
114CJe4v88CJ1CJ:2-186Ribosomal_S4,S4221 → 221.1 → 221.1.2
115CKe4v88CK1CK:1-98S10_plectin101 → 101.1 → 101.1.2
116CLe4v88CL1CL:2-147Ribosomal_S17,Ribosomal_S17_N2 → 2.1 → 2.1.1
117CMe4v88CM1CM:20-143Ribosomal_L7Ae301 → 301.1 → 301.1.1
118CNe4v88CN1CN:83-151Ribosomal_S15616 → 616.1 → 616.1.1
119CNe4v88CN2CN:2-82Ribosomal_S13_N101 → 101.40 → 101.40.1
120COe4v88CO1CO:10-137Ribosomal_S112484 → 2484.1 → 2484.1.1
121CPe4v88CP1CP:4-138Ribosomal_S19838 → 838.1 → 838.1.1
122CQe4v88CQ1CQ:2-143Ribosomal_S9212 → 212.1 → 212.1.1
123CRe4v88CR1CR:2-122Ribosomal_S17e101 → 101.1 → 101.1.17
124CSe4v88CS1CS:2-146Ribosomal_S13102 → 102.2 → 102.2.1
125CTe4v88CT1CT:2-144Ribosomal_S19e101 → 101.1 → 101.1.2
126CUe4v88CU1CU:12-121Ribosomal_S10304 → 304.44 → 304.44.1
127CVe4v88CV1CV:1-87Ribosomal_S21e3167 → 3167.1 → 3167.1.1
128CWe4v88CW1CW:68-130Ribosomal_S84988 → 4988.1 → 4988.1.1
129CWe4v88CW2CW:2-67Ribosomal_S8320 → 320.2 → 320.2.1
130CXe4v88CX1CX:2-145Ribosom_S12_S232 → 2.1 → 2.1.1
131CYe4v88CY1CY:2-135Ribosomal_S24e304 → 304.109 → 304.109.1
132CZe4v88CZ1CZ:37-105Ribosomal_S25101 → 101.1 → 101.1.2
133Dae4v88Da1Da:2-149Ribosomal_L27A2490 → 2490.3 → 2490.3.1
134DAe4v88DA1DA:2-98Ribosomal_L22 → 2.1 → 2.1.1
135DAe4v88DA2DA:99-253Ribosomal_L2_C4 → 4.1 → 4.1.1
136Dbe4v88Db1Db:2-47Ribosomal_L29e3212 → 3212.1 → 3212.1.1
137DBe4v88DB1DB:2-387Ribosomal_L31 → 1.1 → 1.1.7
138Dce4v88Dc1Dc:6-105Ribosomal_L7Ae301 → 301.1 → 301.1.1
139DCe4v88DC2DC:2-269Ribosomal_L47559 → 7559.1 → 7559.1.1
140DCe4v88DC3DC:270-362Ribos_L4_asso_C3319 → 3319.1 → 3319.1.1
141Dde4v88Dd1Dd:4-112Ribosomal_L31e259 → 259.1 → 259.1.1
142DDe4v88DD1DD:4-297Ribosomal_L18_c,Ribosomal_L5e2484 → 2484.1 → 2484.1.1
143Dee4v88De1De:2-128Ribosomal_L32e2490 → 2490.1 → 2490.1.1
144DEe4v88DE1DE:2-176Ribosomal_L6e4 → 4.1 → 4.1.1
145Dfe4v88Df1Df:2-107Ribosomal_L35Ae1 → 1.1 → 1.1.7
146DFe4v88DF1DF:22-244Ribosomal_L30,Ribosomal_L30_N887 → 887.1 → 887.1.1
147Dge4v88Dg1Dg:2-103Ribosomal_L34e377 → 377.12 → 377.12.1
148DGe4v88DG1DG:24-254Ribosomal_L7Ae301 → 301.1 → 301.1.1
149Dhe4v88Dh1Dh:2-120Ribosomal_L29192 → 192.4 → 192.4.1
150DHe4v88DH1DH:1-85Ribosomal_L6318 → 318.1 → 318.1.1
151DHe4v88DH2DH:86-191Ribosomal_L6318 → 318.1 → 318.1.1
152Die4v88Di1Di:2-100Ribosomal_L36e3166 → 3166.1 → 3166.1.1
153DIe4v88DI1DI:2-221Ribosomal_L16325 → 325.1 → 325.1.5
154Dje4v88Dj1Dj:2-88Ribosomal_L37e375 → 375.1 → 375.1.1
155DJe4v88DJ1DJ:6-174Ribosomal_L5,Ribosomal_L5_C882 → 882.1 → 882.1.1
156Dke4v88Dk1Dk:3-73Ribosomal_L38e896 → 896.1 → 896.1.1
157Dle4v88Dl1Dl:2-51Ribosomal_L39585 → 585.1 → 585.1.1
158DLe4v88DL1DL:7-193Ribosomal_L13e3210 → 3210.1 → 3210.1.1
159Dme4v88Dm1Dm:77-128Ribosomal_L40e375 → 375.1 → 375.1.1
160DMe4v88DM1DM:2-138KOW,Ribosomal_L14e4 → 4.1 → 4.1.1
161Dne4v88Dn1Dn:1-25Ribosomal_L416069 → 6069.1 → 6069.1.1
162DNe4v88DN1DN:2-204Ribosomal_L15e304 → 304.109 → 304.109.1
163Doe4v88Do1Do:2-106Ribosomal_L44375 → 375.1 → 375.1.1
164DOe4v88DO1DO:3-199Ribosomal_L132490 → 2490.2 → 2490.2.1
165Dpe4v88Dp1Dp:2-92Ribosomal_L37ae375 → 375.1 → 375.1.1
166DPe4v88DP1DP:2-156Ribosomal_L22218 → 218.2 → 218.2.1
167Dqe4v88Dq1Dq:3-107,Dq:184-221Ribosomal_L10304 → 304.60 → 304.60.1
168DQe4v88DQ1DQ:2-186Ribosomal_L182490 → 2490.3 → 2490.3.1
169DRe4v88DR1DR:2-56Ribosomal_L19e637 → 637.1 → 637.1.1
170DRe4v88DR2DR:57-189Ribosomal_L19e_C3050 → 3050.1 → 3050.1.1
171DSe4v88DS1DS:70-172Ribosomal_L18A3115 → 3115.1 → 3115.1.1
172DSe4v88DS2DS:1-693115.1.1.03115 → 3115.1 → 3115.1.1
173DTe4v88DT1DT:2-160Ribosomal_L21e4 → 4.1 → 4.1.1
174DUe4v88DU1DU:11-108Ribosomal_L22e3715 → 3715.1 → 3715.1.1
175DVe4v88DV1DV:2-137Ribosomal_L143174 → 3174.1 → 3174.1.1
176DWe4v88DW1DW:1-135Ribosomal_L24e377 → 377.1 → 377.1.1
177DXe4v88DX1DX:23-142Ribosomal_L23,Ribosomal_L23eN304 → 304.109 → 304.109.1
178DYe4v88DY1DY:2-127KOW, Ribosomal_L264 → 4.1 → 4.1.1
179DZe4v88DZ1DZ:2-136Ribosomal_L27e4 → 4.1 → 4.1.1

Visualization Legend

ECOD domains (colored by index)Unclassified protein regionsNucleic acids (RNA/DNA)Ligands/cofactors