PDB 5FJ8
ELECTRON MICROSCOPY0 chains37 ECOD domains
3D Structure(domains colored, ligands/nucleic acids shown)
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Domains by Chain
Chain Aview chain
9 domainsChain Bview chain
7 domainsChain Cview chain
2 domainsChain Dview chain
1 domainChain Eview chain
2 domainsChain Fview chain
1 domainChain Gview chain
2 domainsChain Hview chain
1 domainChain Iview chain
1 domainChain Jview chain
1 domainChain Kview chain
1 domainChain Lview chain
1 domainChain Mview chain
1 domainChain Nview chain
1 domainChain Oview chain
5 domainsChain Pview chain
1 domainAll Domains (37)
| # | Chain | Domain ID | Range | Family | Classification |
|---|---|---|---|---|---|
| 1 | A | e5fj8A1 | A:2-358 | RNA_pol_Rpb1_1 | 4246 → 4246.1 → 4246.1.1 |
| 2 | A | e5fj8A2 | A:359-402,A:466-551 | RNA_pol_Rpb1_2 | 1 → 1.1 → 1.1.2 |
| 3 | A | e5fj8A3 | A:403-465 | RNA_pol_Rpb1_2 | 275 → 275.1 → 275.1.1 |
| 4 | A | e5fj8A4 | A:552-710 | RNA_pol_Rpb1_3 | 4959 → 4959.1 → 4959.1.1 |
| 5 | A | e5fj8A5 | A:711-919 | RNA_pol_Rpb1_5,RNA_pol_Rpb1_4 | 4958 → 4958.1 → 4958.1.1 |
| 6 | A | e5fj8A6 | A:1085-1136,A:1318-1460 | RNA_pol_Rpb1_5 | 4954 → 4954.1 → 4954.1.1 |
| 7 | A | e5fj8A7 | A:1137-1164,A:1272-1317 | 4956.1.1.0 | 4956 → 4956.1 → 4956.1.1 |
| 8 | A | e5fj8A8 | A:1165-1271 | 4955.1.1.0 | 4955 → 4955.1 → 4955.1.1 |
| 9 | A | e5fj8A9 | A:920-1084 | 4957.1.1.0 | 4957 → 4957.1 → 4957.1.1 |
| 10 | B | e5fj8B1 | B:1030-1149 | RNA_pol_Rpb2_6,RNA_pol_Rpb2_7 | 4043 → 4043.1 → 4043.1.1 |
| 11 | B | e5fj8B2 | B:36-200,B:376-516 | RNA_pol_Rpb2_1,RNA_pol_Rpb2_3 | 4010 → 4010.1 → 4010.1.1 |
| 12 | B | e5fj8B3 | B:783-906 | RNA_pol_Rpb2_6 | 325 → 325.1 → 325.1.7 |
| 13 | B | e5fj8B4 | B:201-375 | RNA_pol_Rpb2_2 | 4041 → 4041.1 → 4041.1.1 |
| 14 | B | e5fj8B5 | B:606-745 | 4042.1.1.0 | 4042 → 4042.1 → 4042.1.1 |
| 15 | B | e5fj8B6 | B:746-782,B:907-1029 | RNA_pol_Rpb2_6 | 1 → 1.1 → 1.1.2 |
| 16 | B | e5fj8B7 | B:517-605 | RNA_pol_Rpb2_4 | 4961 → 4961.1 → 4961.1.1 |
| 17 | C | e5fj8C1 | C:1-75,C:222-335 | RNA_pol_L | 305 → 305.1 → 305.1.1 |
| 18 | C | e5fj8C2 | C:76-221 | RNA_pol_A_bac | 240 → 240.2 → 240.2.1 |
| 19 | D | e5fj8D1 | D:1-71,D:98-161 | RNA_pol_Rpb4 | 102 → 102.1 → 102.1.1 |
| 20 | E | e5fj8E1 | E:1-143 | RNA_pol_Rpb5_N | 2008 → 2008.3 → 2008.3.1 |
| 21 | E | e5fj8E2 | E:144-215 | RNA_pol_Rpb5_C | 840 → 840.1 → 840.1.1 |
| 22 | F | e5fj8F1 | F:71-153 | RNA_pol_Rpb6 | 152 → 152.1 → 152.1.1 |
| 23 | G | e5fj8G1 | G:2-78 | SHS2_Rpb7-N | 872 → 872.1 → 872.1.1 |
| 24 | G | e5fj8G2 | G:79-212 | RNA_pol_Rbc25 | 2 → 2.1 → 2.1.1 |
| 25 | H | e5fj8H1 | H:1-146 | RNA_pol_Rpb8 | 2 → 2.1 → 2.1.1 |
| 26 | I | e5fj8I1 | I:1-42 | RNA_POL_M_15KD | 375 → 375.1 → 375.1.1 |
| 27 | J | e5fj8J1 | J:1-67 | RNA_pol_N | 101 → 101.4 → 101.4.1 |
| 28 | K | e5fj8K1 | K:42-142 | RNA_pol_L_2 | 305 → 305.1 → 305.1.1 |
| 29 | L | e5fj8L1 | L:26-70 | DNA_RNApol_7kD | 375 → 375.1 → 375.1.1 |
| 30 | M | e5fj8M1 | M:71-262 | RPC5 | 59 → 59.1 → 59.1.1 |
| 31 | N | e5fj8N1 | N:274-422 | RNA_pol_Rpc4 | 59 → 59.1 → 59.1.1 |
| 32 | O | e5fj8O1 | O:480-567 | POLR3C_WHD | 101 → 101.1 → 101.1.2 |
| 33 | O | e5fj8O2 | O:568-654 | RPC3_helical | 192 → 192.24 → 192.24.1 |
| 34 | O | e5fj8O3 | O:283-371,O:449-479 | RNA_pol_Rpc82 | 101 → 101.1 → 101.1.2 |
| 35 | O | e5fj8O4 | O:130-282 | RNA_pol_Rpc82 | 101 → 101.1 → 101.1.2 |
| 36 | O | e5fj8O5 | O:31-129 | HTH_9 | 101 → 101.1 → 101.1.2 |
| 37 | P | e5fj8P1 | P:171-189,P:215-271,P:305-317 | RNA_pol_Rpc34 | 101 → 101.1 → 101.1.2 |
Visualization Legend
ECOD domains (colored by index)Unclassified protein regionsNucleic acids (RNA/DNA)Ligands/cofactors