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PDB 5FMF

ELECTRON MICROSCOPY0 chains54 ECOD domains
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3D Structure(domains colored, ligands/nucleic acids shown)

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Domains by Chain

All Domains (54)

#ChainDomain IDRangeFamilyClassification
11e5fmf111:549-785Helicase_C, ERCC3_RAD25_C2004 → 2004.1 → 2004.1.1
21e5fmf121:294-538ResIII2004 → 2004.1 → 2004.1.1
32e5fmf212:256-309TFIIS_C375 → 375.1 → 375.1.1
42e5fmf222:136-255TFIIS_M103 → 103.4 → 103.4.1
5Ae5fmfA1A:337-374,A:436-519RNA_pol_Rpb1_21 → 1.1 → 1.1.2
6Ae5fmfA2A:375-435RNA_pol_Rpb1_2275 → 275.1 → 275.1.1
7Ae5fmfA3A:1060-1102,A:1301-1455RNA_pol_Rpb1_54954 → 4954.1 → 4954.1.1
8Ae5fmfA4A:663-871RNA_pol_Rpb1_5,RNA_pol_Rpb1_44958 → 4958.1 → 4958.1.1
9Ae5fmfA5A:520-662RNA_pol_Rpb1_34959 → 4959.1 → 4959.1.1
10Ae5fmfA6A:872-1059RNA_pol_Rpb1_64957 → 4957.1 → 4957.1.1
11Ae5fmfA7A:1103-1131,A:1243-13004956.1.1.04956 → 4956.1 → 4956.1.1
12Ae5fmfA8A:3-336RNA_pol_Rpb1_14246 → 4246.1 → 4246.1.1
13Ae5fmfA9A:1132-1242RNA_pol_Rpb1_74955 → 4955.1 → 4955.1.1
14Be5fmfB1B:1098-1224RNA_pol_Rpb2_6,RNA_pol_Rpb2_74043 → 4043.1 → 4043.1.1
15Be5fmfB2B:814-850,B:975-1097RNA_pol_Rpb2_61 → 1.1 → 1.1.2
16Be5fmfB3B:219-404RNA_pol_Rpb2_24041 → 4041.1 → 4041.1.1
17Be5fmfB4B:631-8134042.1.1.04042 → 4042.1 → 4042.1.1
18Be5fmfB5B:20-218,B:405-541RNA_pol_Rpb2_1,RNA_pol_Rpb2_34010 → 4010.1 → 4010.1.1
19Be5fmfB6B:851-974RNA_pol_Rpb2_6325 → 325.1 → 325.1.7
20Be5fmfB7B:542-630RNA_pol_Rpb2_44961 → 4961.1 → 4961.1.1
21Ce5fmfC1C:42-172RNA_pol_A_bac240 → 240.2 → 240.2.1
22Ce5fmfC2C:3-41,C:173-268RNA_pol_L305 → 305.1 → 305.1.1
23De5fmfD1D:3-221RNA_pol_Rpb4102 → 102.1 → 102.1.1
24Ee5fmfE1E:2-142RNA_pol_Rpb5_N2008 → 2008.3 → 2008.3.1
25Ee5fmfE2E:143-215RNA_pol_Rpb5_C840 → 840.1 → 840.1.1
26Fe5fmfF1F:72-155RNA_pol_Rpb6152 → 152.1 → 152.1.1
27Ge5fmfG1G:69-171S12 → 2.1 → 2.1.1
28Ge5fmfG2G:1-68SHS2_Rpb7-N872 → 872.1 → 872.1.1
29He5fmfH1H:2-146RNA_pol_Rpb82 → 2.1 → 2.1.1
30Ie5fmfI1I:50-120TFIIS_C375 → 375.1 → 375.1.1
31Ie5fmfI2I:2-49RNA_POL_M_15KD375 → 375.1 → 375.1.1
32Je5fmfJ1J:1-65RNA_pol_N101 → 101.4 → 101.4.1
33Ke5fmfK1K:1-115RNA_pol_L_2305 → 305.1 → 305.1.1
34Le5fmfL1L:25-70DNA_RNApol_7kD375 → 375.1 → 375.1.1
35Me5fmfM1M:2-61TFIIA104 → 104.1 → 104.1.1
36Me5fmfM2M:228-286TFIIA74 → 74.1 → 74.1.1
37Oe5fmfO1O:4-54TFIIA_gamma_N104 → 104.1 → 104.1.1
38Oe5fmfO2O:55-120TFIIA_gamma_C74 → 74.1 → 74.1.1
39Pe5fmfP1P:67-213TFIIB101 → 101.1 → 101.1.10
40Pe5fmfP2P:233-340TFIIB101 → 101.1 → 101.1.10
41Pe5fmfP3P:17-68TF_Zn_Ribbon375 → 375.1 → 375.1.1
42Qe5fmfQ1Q:157-240TBP331 → 331.1 → 331.1.1
43Qe5fmfQ2Q:61-156TBP331 → 331.1 → 331.1.1
44Re5fmfR1R:12-95TFIIE_alpha101 → 101.1 → 101.1.2
45Re5fmfR2R:119-160375.1.1.0375 → 375.1 → 375.1.1
46Se5fmfS1S:125-188TFIIE_beta101 → 101.1 → 101.1.2
47Se5fmfS2S:189-247TFA2_Winged_2101 → 101.1 → 101.1.2
48Ue5fmfU1U:94-396TFIIF_alpha59 → 59.1 → 59.1.1
49Ve5fmfV1V:54-227TFIIF_beta_N59 → 59.1 → 59.1.1
50Ve5fmfV2V:291-359TFIIF_beta101 → 101.1 → 101.1.2
51We5fmfW01W:447-508Tfb2_C4340 → 4340.1 → 4340.1.1
52Xe5fmfX1X:2-64Tfb54340 → 4340.1 → 4340.1.1
53Ye5fmfY2Y:504-718Helicase_C_22004 → 2004.1 → 2004.1.1
54Ye5fmfY3Y:18-244DEAD_22004 → 2004.1 → 2004.1.1

Visualization Legend

ECOD domains (colored by index)Unclassified protein regionsNucleic acids (RNA/DNA)Ligands/cofactors