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PDB 5IY8

ELECTRON MICROSCOPY0 chains56 ECOD domains
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3D Structure(domains colored, ligands/nucleic acids shown)

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Domains by Chain

All Domains (56)

#ChainDomain IDRangeFamilyClassification
10e5iy8010:54-241Ssl12006 → 2006.1 → 2006.1.6
21e5iy8111:1-62Tfb54340 → 4340.1 → 4340.1.1
32e5iy8212:388-459Tfb2_C4340 → 4340.1 → 4340.1.1
43e5iy8313:5-72,3:100-231Tfb42006 → 2006.1 → 2006.1.6
5Ae5iy8A1A:534-685RNA_pol_Rpb1_34959 → 4959.1 → 4959.1.1
6Ae5iy8A2A:1165-1297RNA_pol_Rpb1_74955 → 4955.1 → 4955.1.1
7Ae5iy8A3A:1083-1135,A:1361-1485RNA_pol_Rpb1_54954 → 4954.1 → 4954.1.1
8Ae5iy8A4A:1136-1164,A:1298-1360RNA_pol_Rpb1_54956 → 4956.1 → 4956.1.1
9Ae5iy8A5A:389-449RNA_pol_Rpb1_2275 → 275.1 → 275.1.1
10Ae5iy8A6A:686-894RNA_pol_Rpb1_5,RNA_pol_Rpb1_44958 → 4958.1 → 4958.1.1
11Ae5iy8A7A:351-388,A:450-533RNA_pol_Rpb1_21 → 1.1 → 1.1.2
12Ae5iy8A8A:10-157,A:180-350RNA_pol_Rpb1_14246 → 4246.1 → 4246.1.1
13Ae5iy8A9A:895-1082RNA_pol_Rpb1_64957 → 4957.1 → 4957.1.1
14Be5iy8B1B:806-929RNA_pol_Rpb2_6325 → 325.1 → 325.1.7
15Be5iy8B2B:201-391RNA_pol_Rpb2_24041 → 4041.1 → 4041.1.1
16Be5iy8B3B:769-805,B:930-1053RNA_pol_Rpb2_61 → 1.1 → 1.1.2
17Be5iy8B4B:10-67,B:87-200,B:392-528RNA_pol_Rpb2_1,RNA_pol_Rpb2_34010 → 4010.1 → 4010.1.1
18Be5iy8B5B:1054-1174RNA_pol_Rpb2_6,RNA_pol_Rpb2_74043 → 4043.1 → 4043.1.1
19Be5iy8B6B:619-7684042.1.1.04042 → 4042.1 → 4042.1.1
20Be5iy8B7B:529-618RNA_pol_Rpb2_44961 → 4961.1 → 4961.1.1
21Ce5iy8C1C:43-178RNA_pol_A_bac240 → 240.2 → 240.2.1
22Ce5iy8C2C:1-42,C:179-275RNA_pol_L305 → 305.1 → 305.1.1
23De5iy8D1D:14-142RNA_pol_Rpb4102 → 102.1 → 102.1.1
24Ee5iy8E1E:139-210RNA_pol_Rpb5_C840 → 840.1 → 840.1.1
25Ee5iy8E2E:1-138RNA_pol_Rpb5_N2008 → 2008.3 → 2008.3.1
26Fe5iy8F1F:42-127RNA_pol_Rpb6152 → 152.1 → 152.1.1
27Ge5iy8G1G:78-171S12 → 2.1 → 2.1.1
28Ge5iy8G2G:1-77SHS2_Rpb7-N872 → 872.1 → 872.1.1
29He5iy8H1H:1-150RNA_pol_Rpb82 → 2.1 → 2.1.1
30Ie5iy8I1I:1-59RNA_POL_M_15KD375 → 375.1 → 375.1.1
31Ie5iy8I2I:60-125TFIIS_C375 → 375.1 → 375.1.1
32Je5iy8J1J:1-67RNA_pol_N101 → 101.4 → 101.4.1
33Ke5iy8K1K:1-117RNA_pol_L_2305 → 305.1 → 305.1.1
34Le5iy8L1L:13-58DNA_RNApol_7kD375 → 375.1 → 375.1.1
35Me5iy8M1M:7-67TF_Zn_Ribbon375 → 375.1 → 375.1.1
36Me5iy8M2M:209-316TFIIB101 → 101.1 → 101.1.10
37Me5iy8M3M:68-208TFIIB101 → 101.1 → 101.1.10
38Ne5iy8N1N:322-376TFIIA74 → 74.1 → 74.1.1
39Ne5iy8N2N:9-51,N:308-321TFIIA104 → 104.1 → 104.1.1
40Oe5iy8O1O:54-99TFIIA_gamma_C74 → 74.1 → 74.1.1
41Oe5iy8O2O:1-53TFIIA_gamma_N104 → 104.1 → 104.1.1
42Pe5iy8P1P:153-255TBP331 → 331.1 → 331.1.1
43Pe5iy8P2P:256-337TBP331 → 331.1 → 331.1.1
44Qe5iy8Q1Q:104-204TF_Zn_Ribbon375 → 375.1 → 375.1.1
45Qe5iy8Q2Q:11-103TFIIE_alpha101 → 101.1 → 101.1.2
46Re5iy8R1R:75-146TFIIE_beta101 → 101.1 → 101.1.2
47Re5iy8R2R:147-206TFA2_Winged_2101 → 101.1 → 101.1.2
48Re5iy8R3R:208-239101.1.2.0101 → 101.1 → 101.1.2
49Se5iy8S1S:5-54,S:93-180TFIIF_alpha59 → 59.1 → 59.1.1
50Te5iy8T1T:2-119TFIIF_beta_N59 → 59.1 → 59.1.1
51Te5iy8T2T:175-238TFIIF_beta101 → 101.1 → 101.1.2
52Ue5iy8U1U:242-301TFIIS_C375 → 375.1 → 375.1.1
53Ue5iy8U2U:132-239TFIIS_M103 → 103.4 → 103.4.1
54Ve5iy8V1V:244-492ResIII2004 → 2004.1 → 2004.1.1
55Ve5iy8V2V:493-718Helicase_C, ERCC3_RAD25_C2004 → 2004.1 → 2004.1.1
56We5iy8W1W:11-243DEAD_22004 → 2004.1 → 2004.1.1

Visualization Legend

ECOD domains (colored by index)Unclassified protein regionsNucleic acids (RNA/DNA)Ligands/cofactors