ECODEvolutionary Classification of Protein Domains

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PDB 5K8F

X-RAY DIFFRACTION2.45 Å0 chains12 ECOD domains

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3D Structure(domains colored, ligands/nucleic acids shown)

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Domains by Chain

Chain Aview chain

4 domains

e5k8fA1(A:10-274)e5k8fA2(A:462-542)e5k8fA3(A:543-681)e5k8fA4(A:275-461)

Chain Bview chain

4 domains

e5k8fB1(B:543-681)e5k8fB2(B:11-274)e5k8fB3(B:462-542)e5k8fB4(B:275-461)

Chain Cview chain

4 domains

e5k8fC1(C:543-681)e5k8fC2(C:11-274)e5k8fC3(C:275-461)e5k8fC4(C:462-542)

All Domains (12)

#	Chain	Domain ID	Range	Family	Classification
1	A	e5k8fA1	A:10-274	AMP-binding,ACAS_N	323 → 323.1 → 323.1.1
2	A	e5k8fA2	A:462-542	4011.1.1.0	4011 → 4011.1 → 4011.1.1
3	A	e5k8fA3	A:543-681	AMP-binding_C	327 → 327.5 → 327.5.1
4	A	e5k8fA4	A:275-461	AMP-binding	323 → 323.1 → 323.1.1
5	B	e5k8fB1	B:543-681	AMP-binding_C	327 → 327.5 → 327.5.1
6	B	e5k8fB2	B:11-274	AMP-binding,ACAS_N	323 → 323.1 → 323.1.1
7	B	e5k8fB3	B:462-542	4011.1.1.0	4011 → 4011.1 → 4011.1.1
8	B	e5k8fB4	B:275-461	AMP-binding	323 → 323.1 → 323.1.1
9	C	e5k8fC1	C:543-681	AMP-binding_C	327 → 327.5 → 327.5.1
10	C	e5k8fC2	C:11-274	AMP-binding,ACAS_N	323 → 323.1 → 323.1.1
11	C	e5k8fC3	C:275-461	AMP-binding	323 → 323.1 → 323.1.1
12	C	e5k8fC4	C:462-542	4011.1.1.0	4011 → 4011.1 → 4011.1.1

Visualization Legend

ECOD domains (colored by index)Unclassified protein regionsNucleic acids (RNA/DNA)Ligands/cofactors